Biostar Gene annotation

Showing : gene annotation • reset

vote

replies

156

views

biomaRt gene annotation

updated 19 months ago by James W. MacDonald 58k • written 19 months ago by jnaviapelaez ▴ 10

votes

replies

350

views

R ensemblVEP gene annotation Variant Effect Predictor Ensembl VEP

2.3 years ago ycchang • 0

votes

replies

502

views

recount RNAseq gencode lncRNA gene annotation

updated 2.5 years ago by chris.wilks ▴ 30 • written 2.6 years ago by francesco.gandolfi ▴ 20

votes

replies

2.1k

views

edger DGEList org.hs.eg.db gene annotation

updated 28 days ago by IIart.hubII • 0 • written 3.9 years ago by svlachavas ▴ 780

votes

replies

766

views

gene ontology goslim enrichment analysis gene annotation

5.5 years ago mirko • 0

5 results • Page 1 of 1

Recent ...

Replies

Comment: TCL/TK in R by Bogdan ▴ 620

Mike Mike. I am using Ubuntu 16.04 that has TclTk support that is built-in. In R I have also installed the package "tcltk2" although no s…

Comment: GO enrichment analysis on Solanum lycopersicum proteomics dataset (UniProt IDs) by Javan Okendo • 0

Could you also help me with SARS-COV-2 goa ftp link? I tried to get it from `https://www.ebi.ac.uk/GOA/index` but still I can locate the ex…

Comment: TCL/TK in R by Mike Smith ★ 5.2k

This isn't really a Bioconductor question, so you might get a faster response on a more general R forum. Which operating system are you ru…

Comment: How delete the AnnotationHub downloaded datasets by Mike Smith ★ 5.2k

Thinking about it a bit more, this would be better set in the file .Renviron - that's specifically for setting environment variables. I ca…

Comment: How delete the AnnotationHub downloaded datasets by sabermohammdi.1994 • 0

Thank you so much Mike. It was a great help. I am using Windows. I couldn't find the ".Rprofile" file. Is there any other way to change the…

Votes

Answer: How delete the AnnotationHub downloaded datasets

Answer: Error arrayQualityMetrics

Comment: Running the DESeq2 "DESeqDataSetFromMatrix" function returns a dimname error

Comment: GO enrichment analysis on Solanum lycopersicum proteomics dataset (UniProt IDs)

Answer: scater::plotHeatmap with swap_rownames gives error

Awards • All