Bioconductor EnsemblVEP

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239

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DESeq2 edgeR BP4RNAseq ensemblVEP

updated 5 months ago by Michael Love 40k • written 5 months ago by DHARMESH • 0

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921

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singularity ensemblVEP docker

9 months ago jtaylor-predicine • 0

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612

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ensemblVEP EnsDb.Hsapiens.v79

updated 20 months ago by Kevin Blighe 3.8k • written 20 months ago by anasjamshed1994 • 0

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1.1k

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biomaRt ensembldb Ensembl ensemblVEP Biomart

2.6 years ago • updated 2.4 years ago mchakiachvili ▴ 20

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826

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R ensemblVEP gene annotation Variant Effect Predictor Ensembl VEP

4.2 years ago ycchang • 0

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1.1k

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software error VariantAnnotation ensemblVEP

updated 4.5 years ago by Valerie Obenchain ★ 6.8k • written 4.5 years ago by mumichae ▴ 20

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1.9k

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software error ensemblVEP

updated 4.5 years ago by Martin Morgan 25k • written 4.6 years ago by patrick.turko ▴ 10

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939

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ensemblVEP

updated 5.5 years ago by shepherl 3.5k • written 5.5 years ago by Janet Young ▴ 740

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956

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ensemblvep

6.4 years ago mlrubio • 0

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1.5k

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ensemblvep grch37

6.4 years ago mikko.arvas • 0

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751

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ensemblvep

7.1 years ago clairelsimpson ▴ 10

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1.2k

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ensemblVEP

updated 7.4 years ago by Martin Morgan 25k • written 7.4 years ago by kevin.rue ▴ 320

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1.9k

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ensemblvep

updated 8.8 years ago by Valerie Obenchain ★ 6.8k • written 8.8 years ago by Moiz Bootwalla ▴ 50

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2.0k

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Transcription HapMap PolyPhen SIFT convert genomes ensemblVEP Transcription HapMap SIFT

updated 9.7 years ago by Valerie Obenchain ★ 6.8k • written 9.7 years ago by Thomas Sandmann ▴ 30

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997

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Cancer MLInterfaces bridge ensemblVEP AnnotationHub Cancer MLInterfaces bridge ensemblVEP

9.7 years ago Valerie Obenchain ★ 6.8k

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1.1k

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VariantAnnotation Annotation PolyPhen SIFT annotate VariantAnnotation ensemblVEP Annotation

9.8 years ago Valerie Obenchain ★ 6.8k

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1.1k

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ensemblVEP ensemblVEP

updated 10.0 years ago by Valerie Obenchain ★ 6.8k • written 10.0 years ago by Guest User ★ 12k

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1.8k

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Coverage VariantTools ensemblVEP Coverage VariantTools ensemblVEP

updated 10.5 years ago by Valerie Obenchain ★ 6.8k • written 10.5 years ago by Guest User ★ 12k

18 results • Page 1 of 1

Recent ...

Replies

Comment: Speeding up of DelayedArray::write_block() by Koki ▴ 10

Thank you, I have a very clear understanding of the situation. > COO_Sparse_HDF5RealizationSink(), writeHDF5SparseArray(), COO_H5SparseArr…

Comment: Speeding up of DelayedArray::write_block() by Koki ▴ 10

There are a few places inside my `DelayedTensor` package that use `SparseArraySeed`. Will these stop working in next coming BioC 3.18, whe…

Comment: DelayedArray::read_sparse_block by Hervé Pagès 16k

No. But I will need to modify the `write_block()` method for TENxRealizationSink implemented in **HDF5Array** to make it handle blocks that…

Answer: ''Model_Matrix'' error by Gordon Smyth 48k

This is actually an error message from base R rather than from limma. The error says that `Group` contains 0 or 1 levels, so your assumptio…

Comment: Speeding up of DelayedArray::write_block() by Hervé Pagès 16k

> I don't know the details but do you mean using HDF5RealizationSink or TENxRealizationSink will make it possible to writing sparse multi-d…

Votes

Steps needed to change design (relevel factors) in DESeq2

Answer: DMRcate design

Comment: DMRcate design

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