csSAMfit with covariates
Last seen 13 months ago
i am using csSAMfit to deal with specific differential expression in each cell type using a matrix o deconvoluted cellular components.
As I am a little bit newbie using csSAMfit, two questions
Can deal with covariates?
Can I use it if i want to get the response using a continous variable, i.e age instead of typical binary case vs control?
Thanks in advamce
Last seen 4 minutes ago
WEHI, Melbourne, Australia
If you want to ask a question about csSAM then send it to the csSAM authors:
csSAM is not a Bioconductor package and I know nothing about it. SAM itself can't handle anything other than a two group comparison, so I would guess that csSAM can't either.
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