Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
Showing :
deconvolution
•
reset
0
votes
0
replies
818
views
Cell type deconvolution of RNAseq data- Create signature matrix of cells
deconvolution
rnaseqGene
RNAseq
19 months ago
JG13
• 0
2
votes
2
replies
2.1k
views
How to deal with Expression set assembly problem?
deconvolution
r
scRNAseq
bioinformatics
4.0 years ago
Hasan Alanya
• 0
0
votes
0
replies
1.6k
views
Best deconvolution method
Deconvolution
4.2 years ago
Barista
• 0
0
votes
1
reply
1.0k
views
PSEA deconvolution; some of the coefficient is NA?
PSEA
Deconvolution
5.7 years ago
kavator
▴ 30
0
votes
0
replies
1.4k
views
Deconvolution methods from WGBS data (methylation)
methylCC
deconvolution
methylation
dmrseq
serum
5.8 years ago
marcin.bazyliszek
• 0
0
votes
2
replies
1.2k
views
csSAMfit with covariates
limma
microarray
deconvolution
cell type
updated 6.0 years ago by
Gordon Smyth
53k • written 6.0 years ago by
antgomo
• 0
0
votes
4
replies
1.8k
views
varianceStabilizingTransformation for clustering, deconvolution
deseq2
deconvolution
normalization
limma
updated 7.1 years ago by
Michael Love
43k • written 7.1 years ago by
bruce.moran
▴ 30
0
votes
0
replies
1.5k
views
Deconvolute bulk RNA-Seq from human epithelial tissue scrapings with immune/blood cell contamination
deconvolution
methods
8.0 years ago
casey.rimland
▴ 170
1
vote
1
reply
1.5k
views
Expression deconvolution using PSEA: applicable to RNA-seq?
deconvolution
rnaseq
psea
8.1 years ago
WouterDeCoster
▴ 130
1
vote
1
reply
3.7k
views
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
deconvolution
rna-seq
updated 10.4 years ago by
Steve Lianoglou
★ 13k • written 10.4 years ago by
Pauly Lin
▴ 160
0
votes
0
replies
2.0k
views
CellMix - Custom matrix with Abbas signature
deconvolution
cellmix
10.7 years ago
carleshf
• 0
11 results • Page
1 of 1
Recent ...
Replies
Answer: Unable to create venndiagram using VennDiagram 1.5.1 package
by
kesha
• 0
<a href=https://vavadacasinox.com/>vavadacasinox.com</a>
Comment: How to convert .raw data for use in xcms
by
a2a2asawhaa
• 0
try converting your files to the older mzXML format, which remains highly stable for XCMS. While waiting for large datasets to process, you…
Comment: Which preprocessing steps are needed before running limpa?
by
miro165sabo
• 0
Hi @gordonsmyth, thank you a lot for very fast and valuable response. I edited the question to provide more details.
Answer: Should I use beta1 from limpa::dpc() or limpa::dpcCN(), if they differ?
by
Gordon Smyth
53k
I tend to use dpcCN(), because it more robust than dpc() to experiments with lots of samples and big differences between samples. You coul…
Answer: Which preprocessing steps are needed before running limpa?
by
Gordon Smyth
53k
Please see the example limpa analyses given at <http://github.com/smythlab/limpa>, especially the kidney cancer case study. limpa does not…
Votes
Answer: Which preprocessing steps are needed before running limpa?
Answer: Should I use beta1 from limpa::dpc() or limpa::dpcCN(), if they differ?
Answer: Which preprocessing steps are needed before running limpa?
Answer: Which preprocessing steps are needed before running limpa?
Answer: Should I use beta1 from limpa::dpc() or limpa::dpcCN(), if they differ?
Awards
• All
Scholar
to
Gordon Smyth
53k
Popular Question
to
Peter Hickey
▴ 760
Popular Question
to
Sean Davis
21k
Popular Question
to
James W. MacDonald
68k
Popular Question
to
shepherl
4.3k
Locations
• All
USA,
20 minutes ago
India,
34 minutes ago
Germany,
40 minutes ago
Barcelona, Spain,
40 minutes ago
The city by the bay,
1 hour ago
Traffic: 1179 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6