Showing : deconvolution • reset
2
votes
2
replies
1.1k
views
How to deal with Expression set assembly problem?
deconvolution r scRNAseq bioinformatics
2.2 years ago Hasan Alanya • 0
0
votes
0
replies
906
views
Best deconvolution method
Deconvolution
2.4 years ago Barista • 0
0
votes
1
reply
647
views
PSEA deconvolution; some of the coefficient is NA?
PSEA Deconvolution
3.8 years ago kavator ▴ 30
0
votes
0
replies
865
views
Deconvolution methods from WGBS data (methylation)
methylCC deconvolution methylation dmrseq serum
4.0 years ago marcin.bazyliszek • 0
0
votes
2
replies
727
views
csSAMfit with covariates
limma microarray deconvolution cell type
updated 4.2 years ago by 50k • written 4.2 years ago by • 0
0
votes
4
replies
1.3k
views
varianceStabilizingTransformation for clustering, deconvolution
deseq2 deconvolution normalization limma
updated 5.2 years ago by 41k • written 5.2 years ago by ▴ 30
0
votes
2
replies
1.1k
views
Error in DESeq2 Unmix() function: L-BFGS-B needs finite values of 'fn'
deseq2 deconvolution rnaseq
updated 5.8 years ago by 41k • written 5.8 years ago by • 0
0
votes
0
replies
893
views
Deconvolute bulk RNA-Seq from human epithelial tissue scrapings with immune/blood cell contamination
deconvolution methods
6.2 years ago casey.rimland ▴ 150
1
vote
1
reply
1.0k
views
Expression deconvolution using PSEA: applicable to RNA-seq?
deconvolution rnaseq psea
6.2 years ago WouterDeCoster ▴ 130
0
votes
1
reply
2.2k
views
Question: Deconvolution Methods on RNA-Seq Data (Mixed cell types)
deconvolution rna-seq
updated 8.5 years ago by ★ 13k • written 8.5 years ago by ▴ 150
0
votes
0
replies
1.6k
views
CellMix - Custom matrix with Abbas signature
deconvolution cellmix
8.9 years ago carleshf ▴ 10
11 results • Page 1 of 1
Recent ...
Replies
Comment: DESeq filtering specific to contrasts by Michael Love 41k
It will likely not filter it out, but really the per-dataset details would affect the results.
Comment: DESeq filtering specific to contrasts by Carlin95 • 0
Thanks for clarifying. Could I ask maybe one more thing for my sanity? Let's say you had a multi-factor experiment with contrasts including…
Comment: FilterByExpr low counts with small sample size by Jonathan ▴ 10
Thank you for your answer; However, I have some follow-up questions. Following up in In your [1-2-3 article][1], you say that > "... the…
Comment: DESeq2 a lot of genes showing up as differentially expressed that only have 1 sa by Seyram M. • 0
Thank you very much for your reply! I will do so. Kind regards, Seyram
Comment: Odd behavior of Rsubread::featureCounts when setting `nonOverlap = 0` by isaac.vock • 0
Thank you for your response. I can confirm that setting `-t exon` and/or removing `-s 1` and adding `-O` has no impact on the number of suc…
Votes
Install/Switch between multiple versions of R, Rstudio, and Bioconductor
A: Docker container with bioconductor and devtools
Answer: OrgDb for maize
Comment: significant difference of p-values with dream() after updating VariancePartition
How to tell and visualize up/down regulation of pathways from clusterprofiler gsea output
Awards • All
Popular Question to shepherl 3.8k
Popular Question to BioinfGuru ▴ 30
Popular Question to Gordon Smyth 50k
Scholar to Peter Hickey ▴ 740
Popular Question to sropri • 0
Locations • All
United States, 2 minutes ago
United States, 4 minutes ago
United States, 7 minutes ago
United States, 11 minutes ago
France, 13 minutes ago
Traffic: 896 users visited in the last hour
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6