I'm developing a package which has multiple dependencies (mainly SingleCellExperiment).
Since I started to use Bioconductor v3.12 on R v4.0.1 it started to not install my package from github anymore giving me this error:
Error: package or namespace load failed for ‘DelayedArray’: (converted from warning) multiple methods tables found for ‘which’ Error: package ‘DelayedArray’ could not be loaded Execution halted
Then looking at the loading of the DelayedArray package I get this warning:
> library("DelayedArray") Loading required package: stats4 Loading required package: matrixStats Loading required package: BiocGenerics Loading required package: parallel Attaching package: ‘BiocGenerics’ The following objects are masked from ‘package:parallel’: clusterApply, clusterApplyLB, clusterCall, clusterEvalQ, clusterExport, clusterMap, parApply, parCapply, parLapply, parLapplyLB, parRapply, parSapply, parSapplyLB The following objects are masked from ‘package:stats’: IQR, mad, sd, var, xtabs The following objects are masked from ‘package:base’: anyDuplicated, append, as.data.frame, basename, cbind, colnames, dirname, do.call, duplicated, eval, evalq, Filter, Find, get, grep, grepl, intersect, is.unsorted, lapply, Map, mapply, match, mget, order, paste, pmax, pmax.int, pmin, pmin.int, Position, rank, rbind, Reduce, rownames, sapply, setdiff, sort, table, tapply, union, unique, unsplit, which.max, which.min Loading required package: S4Vectors Attaching package: ‘S4Vectors’ The following object is masked from ‘package:base’: expand.grid Loading required package: IRanges Attaching package: ‘DelayedArray’ The following objects are masked from ‘package:matrixStats’: colMaxs, colMins, colRanges, rowMaxs, rowMins, rowRanges The following objects are masked from ‘package:base’: aperm, apply, rowsum Warning message: multiple methods tables found for ‘which’
Did anyone got the same issue?