Problem for installing arrayQualityMetrics package?
0
0
Entering edit mode
@mathavanbioinfo-11955
Last seen 21 days ago
India

Hello All, I am trying to install the package arrayQualityMetrics Package, I got the error mentioned below

library(arrayQualityMetrics)
Error: package or namespace load failed for ‘arrayQualityMetrics’ in rbind(info, getNamespaceInfo(env, "S3methods")):
 number of columns of matrices must match (see arg 2)

please help to solve this issue

sessionInfo()
R version 3.5.3 (2019-03-11)
Platform: x86_64-w64-mingw32/x64 (64-bit)
Running under: Windows 10 x64 (build 18362)

Matrix products: default

locale:
[1] LC_COLLATE=English_United States.1252  LC_CTYPE=English_United States.1252   
[3] LC_MONETARY=English_United States.1252 LC_NUMERIC=C                          
[5] LC_TIME=English_United States.1252    

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
 [1] genefilter_1.64.0     splines_3.5.3         lattice_0.20-41       gcrma_2.54.0         
 [5] colorspace_1.4-1      vctrs_0.3.2           stats4_3.5.3          base64enc_0.1-3      
 [9] blob_1.2.1            survival_3.2-3        XML_3.99-0.3          rlang_0.4.7          
[13] pillar_1.4.6          glue_1.4.1            DBI_1.1.0             RColorBrewer_1.1-2   
[17] affy_1.60.0           BiocGenerics_0.28.0   bit64_4.0.2           jpeg_0.1-8.1         
[21] affyio_1.52.0         lifecycle_0.2.0       zlibbioc_1.28.0       Biostrings_2.50.2    
[25] munsell_0.5.0         gtable_0.3.0          codetools_0.2-16      memoise_1.1.0        
[29] Biobase_2.42.0        IRanges_2.16.0        Cairo_1.5-12.2        parallel_3.5.3       
[33] AnnotationDbi_1.44.0  preprocessCore_1.44.0 Rcpp_1.0.5            acepack_1.4.1        
[37] xtable_1.8-4          scales_1.1.1          BiocManager_1.30.10   S4Vectors_0.20.1     
[41] annotate_1.60.1       XVector_0.22.0        bit_4.0.4             png_0.1-7            
[45] ggplot2_3.3.2         digest_0.6.25         grid_3.5.3            tools_3.5.3          
[49] bitops_1.0-6          magrittr_1.5          RCurl_1.98-1.2        RSQLite_2.2.0        
[53] tibble_3.0.3          Formula_1.2-3         crayon_1.3.4          pkgconfig_2.0.3      
[57] ellipsis_0.3.1        Matrix_1.2-18         affyPLM_1.58.0        rstudioapi_0.11      
[61] R6_2.4.1              compiler_3.5.3
R Microarray • 822 views
ADD COMMENT
0
Entering edit mode

Could you check the results of BiocManager::valid() to see if you have a valid installation of Bioconductor?

For What Its Worth there have been newer R releases and to stay up to date with latest versions of packages it is recommended if possible to update to the current R 4.0.

ADD REPLY

Login before adding your answer.

Traffic: 1020 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6