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Sandy
▴
10
@sandy-6204
Last seen 10.5 years ago
Hi James,
probeSetSummary2(hgOver) works well as long as there are no NA's in
this
particuar step:
list1<- (unlist(mget(selectedgenes,ath1121501ACCNUM,)))
In the presence of NA's, then probeSetSummary2(hgOver) gives me this
warning
Warning message:
The vector of geneIds used to create the GOHyperGParamsobject was not
a
named vector.
If you want to know the probesets that contributed to this result
either use a named vector for gene Ids, or pass a vector of probeset
IDs
via sigProbesets.
And then most GO terms go missing in the result.
What do I do in such a case?
