Question: problems in biocLite
0
5.1 years ago by
sara.m790
sara.m790 wrote:

Hi, I am Sara a post doc from the University Roma Tre in Rome. I am trying to install RHugin which has dependencies on the Bioconductor packages graph and Rgraphviz. When I run the command

source("http://bioconductor.org/biocLite.R")

R returns an error message that it cannot connect and a warning message in file(filename, "r", encoding = encoding) :
it cannot connect to 'bioconductor.org' .

Apparently there are not problems in internet connection.

Sara

bioclite installation • 927 views
modified 5.1 years ago by Martin Morgan ♦♦ 24k • written 5.1 years ago by sara.m790
2

Please edit your post to include the exact output of the command

source("http://bioconductor.org/biocLite.R")

Also, please include the output of the command

sessionInfo()

Perhaps the problem is related to a 'proxy'; see How to install BioConductor packages with a computer behind a proxy. On windows you might try setInternet2(TRUE)