problems in biocLite

0

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sara.m79 • 0

@saram79-6851

Last seen 9.6 years ago

Hi, I am Sara a post doc from the University Roma Tre in Rome. I am trying to install RHugin which has dependencies on the Bioconductor packages graph and Rgraphviz. When I run the command

source("http://bioconductor.org/biocLite.R")

R returns an error message that it cannot connect and a warning message in file(filename, "r", encoding = encoding) :
it cannot connect to 'bioconductor.org' .

Apparently there are not problems in internet connection.

Could you help me, please?

Sara

biocLite installation • 1.3k views

ADD COMMENT • link updated 9.5 years ago by Martin Morgan 25k • written 9.6 years ago by sara.m79 • 0

2

Entering edit mode

Please edit your post to include the exact output of the command

source("http://bioconductor.org/biocLite.R")

Also, please include the output of the command

sessionInfo()

Confirm that you can access http://bioconductor.org/biocLite.R from your web browser.

Perhaps the problem is related to a 'proxy'; see How to install BioConductor packages with a computer behind a proxy. On windows you might try setInternet2(TRUE)

ADD REPLY • link 9.5 years ago Martin Morgan 25k

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