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nick • 0
@nick-11777
Last seen 4.5 years ago
When running R CMD INSTALL for the DirichletMultinomial package on my machine, I'm getting the following error:
Error: (converted from warning) replacing previous import ‘stats::mad’ by ‘BiocGenerics::mad’ when loading ‘IRanges’

After searching online, I see this has something to do with the NAMESPACE importing stats and BiocGenerics, both with the method mad.

Any ideas on how to fix this?

iranges biocgenerics dirichletmultinomial • 911 views
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Probably need to update. IRanges has not imported mad() from stats since 7/30/2015.

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@martin-morgan-1513
Last seen 4 days ago
United States

Following Michael's suggestion, it seems likely that you have a mix of Bioconductor packages from different Bioconductor releases. Use BiocInstaller::biocVersion() to get the version of Bioconductor in use, and BiocInstaller::biocValid() to identify packages that are out-of-sync.