Is there any FlowSorted.DLPFC demo dataset for the EPIC or EPICv2 arrays?
Could you describe the objective behind this question ? There does not seem to be a specific package like FlowSorted.DLPFC.450k but for EPIC. However there are several DLPFC GEO methylation datasets available assessed with EPIC.
I am willing to estimate cell counts using a reference approach (for minfi function: estimateCellCounts() - Cell Proportion Estimation). There is a Bioconductor Package containing the reference data FlowSorted.DLPFC.450k. I am wondering if there is any specific reference package for EPIC or EPICv2 too?
I think you could use the 450k dataset because almost all probes of the 450k are on the EPIC, then the probes used for the deconvolution should work on your dataset.
Thank you for responding.
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