Question

how do meta-analysis with Na p-value of DESeq2 ?

0

Entering edit mode

ed_isfahani • 0

@ed_isfahani-12190

Last seen 7.1 years ago

Hi all,

I want to do meta-analysis with p-value of DESeq2,as you know there are some NA value for p-value in each experiment. what should I do with them,I can not remove them in each experiment because for meta-analysis I should have value for all of genes. can I use 1 instead of NA or not? if no, what should I do?

deseq2 meta-analysis metaseq • 756 views

ADD COMMENT • link updated 7.1 years ago by Michael Love 42k • written 7.1 years ago by ed_isfahani • 0

score 2 · Answer 1 · 2017-07-05

2

Entering edit mode

Michael Love 42k

@mikelove

Last seen 15 hours ago

United States

Yes, you can replace them with a 1

ADD COMMENT • link 7.1 years ago Michael Love 42k