Search
1
vote
0
answers
52
views
0
answers
Suggestion: spinning wheel for AnnotationHub
annotationhub written 3 days ago by Michael Love ♦ 13k
0
votes
0
answers
127
views
0
answers
Why are important organisms missing from AnnotationHub. Example query(hub, "Zea")
orgdb annotationhub written 10 days ago by slbai01 • 0
0
votes
0
answers
172
views
0
answers
AnnotationHub not working
annotation annotationhub written 16 days ago by genprabir106 • 0 • updated 16 days ago by daniel.vantwisk ♦ 20
1
vote
0
answers
79
views
0
answers
News: complete set of OrgDb packages have been added to AnnotationHub
orgdb annotationhub news bioconductor written 10 weeks ago by shepherl ♦♦ 320
2
votes
0
answers
97
views
0
answers
News: ensembl 89 gtfs and fasta twobits have been added to AnnotationHub
annotationhub news bioconductor ensembl89 written 10 weeks ago by shepherl ♦♦ 320
0
votes
0
answers
132
views
0
answers
News: ensembl 87 and 88 gtfs and fasta twobits have been added to AnnotationHub
annotationhub news bioconductor written 3 months ago by shepherl ♦♦ 320
2
votes
2
answers
154
views
2
answers
R getting "stuck" with RoadMap resource retrieval through AnnotationHub
annotationhub roadmap project written 3 months ago by vanesa_1230 • 0
8
votes
0
answers
1.6k
views
6 follow
0
answers
Tutorial: Epigenomics RoadMap Project files now accessible via AnnotationHub
annotationhub nih epigenomics bigdata roadmap project tutorial written 2.2 years ago by Sonali Arora • 360 • updated 3 months ago by vanesa_1230 • 0
2
votes
2
answers
199
views
2
answers
AnnotationHub-cant extract database
annotationhub written 4 months ago by ecpierce • 0 • updated 4 months ago by Valerie Obenchain ♦♦ 6.2k
1
vote
0
answers
179
views
0
answers
annotation of SV (Structural Variants)
variantannotation annotationhub written 4 months ago by Bogdan • 470
0
votes
2
answers
250
views
2
answers
Easy way to turn OrgDb object from AnnotationHub into package?
annotationdbi annotationforge pathview annotationhub written 6 months ago by Jenny Drnevich • 1.9k • updated 6 months ago by Valerie Obenchain ♦♦ 6.2k
1
vote
2
answers
228
views
2
answers
mismatch between AnnotationHub ensembl v71 hsapiens and direct download using rtracklayer
annotationhub written 7 months ago by mviterson • 10 • updated 7 months ago by Valerie Obenchain ♦♦ 6.2k
1
vote
1
answer
212
views
1
answer
Problem with AnnotationHub()
annotationhub written 7 months ago by rex.burger • 10 • updated 7 months ago by Valerie Obenchain ♦♦ 6.2k
0
votes
2
answers
173
views
2
answers
"quiet" mode for AnnotationHub?
annotationhub written 7 months ago by Robert K. Bradley • 40
5
votes
4
answers
256
views
4
answers
Certificate problem with ExperimentHub / AnnotationHub
annotationhub software error experimenthub curatedmetagenomicdata written 8 months ago by morganx • 10 • updated 8 months ago by Levi Waldron • 310
5
votes
1
answer
194
views
1
answer
AnnotationHub: two broad peaks from same url are not the same
annotationhub bugs bed encode written 8 months ago by wcstcyx • 30
0
votes
1
answer
237
views
1
answer
bad restore file magic number with AnnotationHub
annotationhub written 9 months ago by jason.serviss • 0 • updated 8 months ago by Valerie Obenchain ♦♦ 6.2k
0
votes
1
answer
243
views
1
answer
Additions to AnnotationHub (for example, CpG islands for hg38 and mm10)
annotationhub written 9 months ago by rcavalca • 30 • updated 9 months ago by Valerie Obenchain ♦♦ 6.2k
3
votes
1
answer
263
views
1
answer
AnnotationHub: A RPKM data.frame of Epigenomics RoadMap Project seems strange
annotationhub rpkm roadmap project data.frame written 10 months ago by wcstcyx • 30
0
votes
1
answer
234
views
1
answer
error with downloading AnnotationHub item AH134
annotationhub written 10 months ago by Robert K. Bradley • 40 • updated 10 months ago by Valerie Obenchain ♦♦ 6.2k
1
vote
1
answer
200
views
1
answer
Why No Uniprot information for some other organisms in AnnotationHub?
annotationhub hub written 11 months ago by wssdandan2009 • 0 • updated 11 months ago by Valerie Obenchain ♦♦ 6.2k
0
votes
1
answer
268
views
1
answer
AnnotationHub's NCBI OrgDB have older EGSOURCEDATE than org.Xy.eg.db?
annotationhub written 11 months ago by Jenny Drnevich • 1.9k • updated 11 months ago by Valerie Obenchain ♦♦ 6.2k
4
votes
1
answer
280
views
1
answer
AnnotationHub and ExperimentHub make "~" directory in my home
annotationhub experimenthub written 11 months ago by Michael Love ♦ 13k • updated 11 months ago by Valerie Obenchain ♦♦ 6.2k
0
votes
1
answer
242
views
1
answer
Error in GOFrame due to NA for unsupported organism (Gene Ontology)
gostats reportingtools annotationhub written 13 months ago by cagenet34 • 10 • updated 13 months ago by James W. MacDonald ♦ 44k
7
votes
3
answers
2.2k
views
3
answers
Error in sqliteSendQuery(conn, statement): error in statement: no such table: c.probes
limma annotationdbi edger annotationhub kegga written 17 months ago by Rinaldo Bertossa • 20 • updated 13 months ago by cagenet34 • 10
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