Showing: annotationhub • reset
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The total genes items (e.g. ENTREZ ID, SYMBOL) in OrgDb (Salmo salar; [["AH66207"]]) is just half the gene number in NCBI ?!
annotationdbi annotationhub annotationdb profiler written 9 days ago by wecai • 0
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AnnotationHub corrupt database
annotationhub written 3.7 years ago by Koen Van den Berge • 170 • updated 6 weeks ago by shepherl ♦♦ 1.3k
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News: ensembl 95 gtfs and fasta twobits have been added to AnnotationHub
annotationdata annotationhub news ensembl gtf 2bit written 9 weeks ago by shepherl ♦♦ 1.3k
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Ensembl plants at annotationHub?
arabidopsis thaliana annotationhub ensembl ensembldb plant written 5 months ago by Guido Hooiveld • 2.4k • updated 5 months ago by Johannes Rainer • 1.4k
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News: ensembl 94 gtfs and fasta twobits have been added to AnnotationHub
annotationdata annotationhub news ensembl gtf 2bit written 6 months ago by shepherl ♦♦ 1.3k
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annotationhub: data update
annotationhub written 8 months ago by Kasper Daniel Hansen ♦ 6.4k • updated 8 months ago by shepherl ♦♦ 1.3k
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News: ensembl 93 gtfs and fasta twobits have been added to AnnotationHub
annotationdata annotationhub news ensembl gtf 2bit written 8 months ago by shepherl ♦♦ 1.3k
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AnnotationHub, force update snapshot date?
annotationhub written 9 months ago by Vang Le • 70 • updated 9 months ago by shepherl ♦♦ 1.3k
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Eliminating repetitive calls to ExperimentHub
annotationhub experimenthub large dataset written 11 months ago by slinker • 20
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initialization of AnnotationHub() in version 2.12.0 is problematically verbose
annotationhub written 11 months ago by Robert K. Bradley • 40 • updated 11 months ago by Martin Morgan ♦♦ 23k
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News: ensembl 92 gtfs and fasta twobits have been added to AnnotationHub
annotationhub news ensembl gtf 2bit written 12 months ago by shepherl ♦♦ 1.3k
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News: ensembl 91 gtfs and fasta twobits have been added to AnnotationHub
annotationhub news ensembl gtf 2bit written 16 months ago by shepherl ♦♦ 1.3k
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News: OrgDbs in AnnotationHub
orgdb annotationhub news written 17 months ago by shepherl ♦♦ 1.3k
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News: OrgDb and TxDb packages have been added to AnnotationHub for Bioc 3.6
annotation orgdb annotationhub news bioconductor txdb written 18 months ago by shepherl ♦♦ 1.3k
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Trouble loading Roadmap data from AnnotationHub
annotationhub written 18 months ago by bletteb18 • 0 • updated 18 months ago by shepherl ♦♦ 1.3k
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Error: failed to load resource reason: invalid class GRanges object: seqnames(x) contains missing values for newer GRCh38 annotations
annotationhub written 18 months ago by marcel.schilling • 10
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AnnotationHub downloading dataset fail
annotationhub download_error written 19 months ago by vitay.dora • 0 • updated 19 months ago by James W. MacDonald ♦ 49k
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Suggestion: spinning wheel for AnnotationHub
annotationhub written 20 months ago by Michael Love ♦ 23k • updated 19 months ago by shepherl ♦♦ 1.3k
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querying annotation hub for common TF, in common cell line returns no results....
annotate annotationhub written 19 months ago by chrisclarkson100 • 30 • updated 19 months ago by shepherl ♦♦ 1.3k
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News: ensembl 90 ensembldb EnsDb databases have been added to AnnotationHub
annotation annotationhub news ensembl ensemblb written 20 months ago by Johannes Rainer • 1.4k
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News: ensembl 90 gtfs and fasta twobits have been added to AnnotationHub
annotationhub news bioconductor written 20 months ago by shepherl ♦♦ 1.3k • updated 20 months ago by Martin Morgan ♦♦ 23k
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Why are important organisms missing from AnnotationHub. Example query(hub, "Zea")
orgdb annotationhub written 20 months ago by slbai01 • 0
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AnnotationHub not working
annotation annotationhub written 20 months ago by genprabir106 • 0 • updated 20 months ago by daniel.vantwisk ♦ 50
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News: complete set of OrgDb packages have been added to AnnotationHub
orgdb annotationhub news bioconductor written 22 months ago by shepherl ♦♦ 1.3k
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News: ensembl 89 gtfs and fasta twobits have been added to AnnotationHub
annotationhub news bioconductor ensembl89 written 22 months ago by shepherl ♦♦ 1.3k
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