0
votes
0
answers
99
views
0
answers
2
votes
2
answers
87
views
2
answers
error reading ballgown object
R ballgown written 23 days ago by l.j.leach0
0
votes
0
answers
73
views
0
answers
Subset functionin R
rnaseq R ballgown written 22 days ago by amy160
0
votes
0
answers
67
views
0
answers
1
vote
1
answer
94
views
1
answer
Error in stattest function
rnaseq R ballgown written 25 days ago by amy160 • updated 24 days ago by Alyssa Frazee150
0
votes
2
answers
524
views
2
answers
error in filtering genes with rowVars(gexpr(bg_chrX)) >1
genefilter ballgown written 6 months ago by fubeide0 • updated 5 weeks ago by importantrubbish0
0
votes
1
answer
95
views
1
answer
Multiple pairwise comparisons in ballgown
ballgown written 5 weeks ago by rachael.detar0 • updated 5 weeks ago by Alyssa Frazee150
1
vote
1
answer
108
views
1
answer
Error in reading ballgown object
R ballgown written 5 weeks ago by amy160 • updated 5 weeks ago by Alyssa Frazee150
0
votes
4
answers
448
views
4
answers
1
vote
1
answer
190
views
1
answer
RNA-seq for DGE
illumina ballgown stringtie hisat2 written 3 months ago by amy160 • updated 3 months ago by k.vitting.seerup20
0
votes
1
answer
454
views
1
answer
0
votes
0
answers
140
views
0
answers
0
votes
1
answer
418
views
1
answer
Ballgown Error in file(file, "rt") : invalid 'description' argument
rna-seq ballgown written 5 months ago by vinayjrao0 • updated 5 months ago by Alyssa Frazee150
1
vote
3
answers
312
views
3
answers
0
votes
0
answers
188
views
0
answers
0
votes
1
answer
330
views
1
answer
limma regularization on Ballgown
limma ballgown written 8 months ago by rodri20060 • updated 8 months ago by Alyssa Frazee150
0
votes
1
answer
337
views
1
answer
P value <0.05 and Q values~ 1
ballgown written 9 months ago by akilabioinfo0 • updated 9 months ago by Jeff Leek500
1
vote
2
answers
1.9k
views
2
answers
Ballgown up and down regulated genes
differential expression ballgown written 2.1 years ago by psbpedrobarbosa0 • updated 10 months ago by kapeelc0
0
votes
2
answers
421
views
2
answers
Results with very few genes with qval <0.05
ballgown written 11 months ago by jdchc0 • updated 11 months ago by aiwa0
2
votes
6
answers
2.3k
views
6
answers
StringTie + Ballgown: handling biological replicates
ballgown stringtie written 24 months ago by bhawley199110 • updated 11 months ago by linda.boshans0
0
votes
0
answers
383
views
0
answers
0
votes
1
answer
309
views
1
answer
IRanges error loading rsem data into ballgown
ballgown written 12 months ago by jchenpku0 • updated 12 months ago by Jeff Leek500
0
votes
1
answer
932
views
1
answer
The common error with ballgown has not been solved!
software error ballgown written 12 months ago by Sara0 • updated 12 months ago by Jeff Leek500
0
votes
2
answers
576
views
2
answers
How fold change is calculated in Ballgown?
ballgown written 13 months ago by Ir0
0
votes
1
answer
581
views
1
answer
HISAT-StringTie-Ballgown, order of biological replicates in script design
rna-seq ballgown written 13 months ago by Ir0 • updated 13 months ago by Alyssa Frazee150
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