0
votes
0
answers
76
views
0
answers
0
votes
0
answers
83
views
0
answers
2
votes
1
answer
234
views
1
answer
CAGEr BAM files size issue
biostrings cager software error R bam written 6 months ago by orzechowska.mag10 • updated 5 months ago by Charles Plessy30
1
vote
1
answer
314
views
1
answer
Gviz off-by-one with STAR BAM
coverage gviz bam star off-by-one written 10 months ago by bernt.popp0 • updated 10 months ago by Martin Morgan ♦♦ 21k
1
vote
1
answer
310
views
1
answer
Gviz sashimi read count
gviz bam read counting sashimi plots sashimi written 10 months ago by bernt.popp0 • updated 10 months ago by Robert Ivanek430
3
votes
1
answer
295
views
1
answer
4
votes
1
answer
290
views
1
answer
bamsignals - bamcoverage has no strand-specific option??
coverage bam bamsignals written 12 months ago by gtho12340 • updated 12 months ago by helmuth0
0
votes
0
answers
311
views
0
answers
3
votes
1
answer
548
views
1
answer
Rsubread featureCounts with strand information
rnaseq rsubread bam written 13 months ago by rubi80 • updated 12 months ago by Aaron Lun18k
3
votes
1
answer
337
views
1
answer
Plotting only intergenic reads on chromosomes?
genomegraphs rsamtools gviz bam samtools written 17 months ago by Mehmet Ilyas Cosacak0 • updated 17 months ago by Martin Morgan ♦♦ 21k
8
votes
2
answers
307
views
2
answers
Counting ambiguously mapped reads per feature
rnaseq genomicranges rsamtools genomicalignments bam written 18 months ago by rubi80 • updated 18 months ago by Gordon Smyth32k
1
vote
1
answer
288
views
1
answer
CopywriteR can't finish calculating copy number
bam copywriter written 19 months ago by thestaroceanster0 • updated 19 months ago by t.kuilman100
2
votes
2
answers
398
views
2
answers
2
votes
1
answer
682
views
1
answer
3
votes
2
answers
562
views
2
answers
about VCF and BAM files
bam snv written 21 months ago by Bogdan480
0
votes
1
answer
417
views
1
answer
Reading BAM file for RapidR
bam rapidr written 22 months ago by Sushant Pawar0 • updated 22 months ago by Aaron Lun18k
0
votes
1
answer
462
views
1
answer
diffHic preparePairs() does not identify paired-end reads
bam paired diffhic preparepairs written 23 months ago by ilyco0 • updated 23 months ago by Aaron Lun18k
3
votes
1
answer
503
views
1
answer
Read in specific rows of a BAM file that match a certain RNAME
bam scanbamparam written 2.1 years ago by K40 • updated 2.1 years ago by Martin Morgan ♦♦ 21k
1
vote
5
answers
464
views
5
answers
0
votes
0
answers
627
views
0
answers
0
votes
1
answer
684
views
1
answer
0
votes
1
answer
540
views
1
answer
2
votes
1
answer
442
views
1
answer
0
votes
3
answers
1.6k
views
3
answers
SummarizeOverlaps in R
bam summarizeoverlaps rstudio written 2.5 years ago by Lillyhchen10 • updated 2.5 years ago by Jake50
5
votes
2
answers
894
views
2
answers
Reading alignments above a mapq threshold from BAM files
rsamtools bam written 2.6 years ago by Johannes Rainer1.1k • updated 2.6 years ago by Martin Morgan ♦♦ 21k
<prev • 38 results • page 1 of 2 • next >

Help
Access

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 2.2.0
Traffic: 138 users visited in the last hour