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Comment: Rsubread alignment crashes at 35%, valgrind indicates invalid writes
by
Yang Liao
▴ 440
Thanks for taking the time to report the bug! The provided `Valgrind` report is very helpful and suggests the issue lies within the banded …
Comment: Rsubread - Error on buildindex - big ref sequence
by
mdejesus
• 0
Hi just checking if this limit still exists, and/or if there are plans to lift it? subread is our preferred tool kit, but we have some CRIS…
Answer: dmpFinder for other objects
by
James W. MacDonald
67k
The help page is helpful for answering your question: ``` Usage: dmpFinder(dat, pheno, type = c("categorical", "continuous"), …
Comment: DEseq2 time-series design
by
jihoon.kim.1495
• 0
Hello, I wanted to follow up on this with a clarification question. I repeated a similar design above to find a list of genes that had a…
Comment: Highly DE genes but small count difference within conditions
by
Michael Love
42k
These are both hard to call for me, looking at the plots. It ends up depending on the information sharing from the rest of the genes, and t…
Votes
GSVA ssGSEA vs. Broad implementation of ssGSEA
Answer: How to control batch effect if Group and batch are same?
Answer: How to control batch effect if Group and batch are same?
Answer: How to control batch effect if Group and batch are same?
Comment: Convert HGVS Representation back to Reference Genome Coordinates
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