Log In
Sign Up
about
faq
Ask a question
Latest
News
Jobs
Tutorials
Tags
Users
New Post
Latest
News
Jobs
Tutorials
Tags
Users
Log In
Sign Up
About
Limit
all time
today
this week
this month
this year
Unanswered
All posts
Sort
Update
Answers
Bookmarks
Creation
Replies
Rank
Views
Votes
No posts found.
0 results • Page
1 of 1
Recent ...
Replies
Comment: ChAMP installation issue
by
James W. MacDonald
66k
If you have beta values, try the `DSS` package. An alternative is to compute the logit transform (to M-values), which are amenable to analy…
Answer: pathview error
by
James W. MacDonald
66k
The obvious would be to check that you have genes that map to that pathway. It's unusual to have so many NA values for your NCBI gene IDs, …
Comment: ChAMP installation issue
by
Tahirah
• 0
Thanks a lot. But unfortunately it didn't work. I guess I will have to wait until ChAMP becomes available for version 3.19 In the meantime …
Comment: Slightly different count plots from R and spreadsheet
by
boczniak767
▴ 720
Thank you, but now I have six black and six red boxes (3 black, 3 red, 3 black, 3 red) whereas for each timepoint I have two experimental v…
Comment: Slightly different count plots from R and spreadsheet
by
Michael Love
42k
I added `col` so you can see the different groups. I just want you to be able to see the raw data so you can infer which plot is correct.
Votes
Including squared covariates to account for non-linear dependencies in differential gene expression analysis
DESeq2 DE gene expression of scRNA-seq pseudobulk
Answer: Multiple factor DSEq2 result generates weird volcano plot
DESeq2 for single cell pseudobulk processing
Simultaneously adding two different covariates in the model gives error in DESeq2.
Awards
• All
Centurion
to
boczniak767
▴ 720
Popular Question
to
abhisek001
• 0
Scholar
to
Mike Smith
★ 6.5k
Popular Question
to
mohammedtoufiq91
▴ 10
Popular Question
to
Gordon Smyth
50k
Locations
• All
Poland,
4 minutes ago
United States,
6 minutes ago
United States,
12 minutes ago
Bangladesh,
24 minutes ago
United States,
25 minutes ago
Traffic: 869 users visited in the last hour
Content
Search
Users
Tags
Badges
Help
About
FAQ
Access
RSS
API
Stats
Use of this site constitutes acceptance of our
User Agreement and Privacy Policy
.
Powered by the
version 2.3.6