2
votes
1
answer
76
views
1
answer
Deseq2: padj value changes with varying alpha
rnaseq deseq2 counts written 4 weeks ago by yoursbassanio0 • updated 4 weeks ago by Michael Love15k
0
votes
1
answer
77
views
1
answer
0
votes
2
answers
133
views
2
answers
DESeq2 ComputeSumFactors extract normalized counts
normalization deseq2 counts written 9 weeks ago by herrmannmaria940 • updated 9 weeks ago by Michael Love15k
0
votes
0
answers
121
views
0
answers
4
votes
2
answers
217
views
2
answers
Help: extract counts from RNA-seq .bam/.bai files
edger counts written 6 months ago by mat14920 • updated 6 months ago by Aaron Lun17k
6
votes
1
answer
349
views
1
answer
0
votes
1
answer
255
views
1
answer
IRanges object from count matrix
rnaseq iranges genomicranges featurecounts counts written 9 months ago by Assa Yeroslaviz1.3k • updated 9 months ago by Hervé Pagès ♦♦ 13k
0
votes
2
answers
240
views
2
answers
small RNAs quantification
smallrna counts written 14 months ago by riccardo40
2
votes
1
answer
405
views
1
answer
DESeq2 Input format
deseq2 counts written 14 months ago by uzer0 • updated 14 months ago by Michael Love15k
1
vote
1
answer
336
views
1
answer
2
votes
1
answer
346
views
1
answer
1
vote
1
answer
284
views
1
answer
2
votes
1
answer
317
views
1
answer
3
votes
1
answer
271
views
1
answer
window counts in csaw
counts csaw written 18 months ago by nobishvarghese0 • updated 18 months ago by Aaron Lun17k
3
votes
1
answer
552
views
1
answer
1
vote
1
answer
830
views
1
answer
How do I extract read counts from DESeq2
deseq2 counts covariates written 20 months ago by hechtp0 • updated 20 months ago by Michael Love15k
1
vote
2
answers
786
views
2
answers
2
votes
2
answers
893
views
2
answers
1
vote
1
answer
838
views
1
answer
Limma/DESeq2: Statistic and readcount of biological replicates
normalization limma deseq2 counts written 22 months ago by Radek40 • updated 22 months ago by Aaron Lun17k
1
vote
1
answer
448
views
1
answer
deseq2 normalized data
regression deseq2 counts written 2.2 years ago by akp0 • updated 2.2 years ago by Michael Love15k
0
votes
1
answer
1.3k
views
1
answer
Not full rank design using Deseq2
deseq2 counts design written 2.8 years ago by Varshna20 • updated 2.8 years ago by Michael Love15k
0
votes
0
answers
461
views
0
answers
3
votes
2
answers
3.1k
views
2
answers
limma voom accessing normalised counts tables
geneexpression rnaseq limma voom counts written 3.1 years ago by Peter Crisp10 • updated 3.1 years ago by Steve Lianoglou12k
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