0
votes
0
answers
71
views
0
answers
0
votes
1
answer
122
views
1
answer
coverage QC file mean duplication and "mom" columns
coverage purecn written 6 months ago by twtoal0 • updated 6 months ago by markus.riester110
3
votes
1
answer
302
views
1
answer
0
votes
0
answers
198
views
0
answers
0
votes
1
answer
276
views
1
answer
0
votes
1
answer
599
views
1
answer
Plot per-base-coverage output of a bed file of whole genome
coverage bed written 15 months ago by sgupt460 • updated 15 months ago by James W. MacDonald48k
2
votes
1
answer
659
views
5 follow
1
answer
GOseq: count bias correction variations?
coverage goseq written 4.3 years ago by Christopher Conley40 • updated 19 months ago by Gordon Smyth35k
0
votes
0
answers
327
views
0
answers
1
vote
1
answer
450
views
1
answer
Gviz off-by-one with STAR BAM
coverage gviz bam star off-by-one written 20 months ago by bernt.popp0 • updated 20 months ago by Martin Morgan ♦♦ 22k
4
votes
1
answer
533
views
1
answer
bamsignals - bamcoverage has no strand-specific option??
coverage bam bamsignals written 22 months ago by gtho12340 • updated 22 months ago by helmuth0
0
votes
1
answer
418
views
1
answer
Views with RleLists and IRangesLists
coverage genomicalignments views irangeslist rlelist written 2.3 years ago by ccanchaya0 • updated 2.3 years ago by Hervé Pagès ♦♦ 13k
0
votes
0
answers
427
views
0
answers
RNA-Seq metagene coverage
coverage written 2.3 years ago by Jake60
0
votes
1
answer
599
views
1
answer
Efficient coverage calculation with RleList and GRanges
coverage granges rle view mean written 2.4 years ago by Christian Ruckert170 • updated 2.4 years ago by Michael Lawrence10k
5
votes
2
answers
361
views
2
answers
2
votes
1
answer
524
views
1
answer
Using edgeR with "traditional" coverage data?
rnaseq coverage edger written 2.6 years ago by bastien.chevreux0 • updated 2.6 years ago by Ryan C. Thompson7.0k
0
votes
1
answer
559
views
1
answer
How to set a negative coverage to ZERO
coverage genomicranges written 2.6 years ago by vanhzh0 • updated 2.6 years ago by Martin Morgan ♦♦ 22k
1
vote
1
answer
510
views
1
answer
6
votes
0
answers
914
views
5 follow
0
answers
0
votes
2
answers
1.2k
views
2
answers
BH vs BY in p.adjust + FDR interpretation
coverage limma written 12.3 years ago by lemerle@embl.de50 • updated 2.8 years ago by Gordon Smyth35k
0
votes
1
answer
1.9k
views
1
answer
1
vote
1
answer
970
views
1
answer
Does coverage() split exon spanning RNA-seq reads?
coverage genomicranges genomicalignments written 3.4 years ago by Jake60 • updated 3.4 years ago by Martin Morgan ♦♦ 22k
0
votes
2
answers
848
views
2
answers
5
votes
1
answer
535
views
1
answer
Calling coverage on GRanges object yields small negative values
coverage granges written 3.6 years ago by Anya10 • updated 3.6 years ago by Hervé Pagès ♦♦ 13k
2
votes
1
answer
1.3k
views
1
answer
Shrink or Expand RLE
coverage iranges granges rle written 3.6 years ago by gen30 • updated 3.6 years ago by Martin Morgan ♦♦ 22k
0
votes
2
answers
996
views
2
answers
Error using Bsmooth.tstat due to NAs
coverage bsseq written 4.2 years ago by Guest User12k • updated 3.7 years ago by parker0
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