0
votes
0
answers
20
views
0
answers
0
votes
1
answer
106
views
1
answer
Views with RleLists and IRangesLists
coverage views irangeslist rlelist genomicalignments written 6 months ago by ccanchaya0 • updated 6 months ago by Hervé Pagès ♦♦ 11k
0
votes
0
answers
85
views
0
answers
RNA-Seq metagene coverage
coverage written 6 months ago by Jake50
0
votes
1
answer
125
views
1
answer
Efficient coverage calculation with RleList and GRanges
coverage mean granges view rle written 6 months ago by Christian Ruckert170 • updated 6 months ago by Michael Lawrence8.8k
5
votes
2
answers
145
views
2
answers
2
votes
1
answer
202
views
1
answer
Using edgeR with "traditional" coverage data?
coverage rnaseq edger written 9 months ago by bastien.chevreux0 • updated 9 months ago by Ryan C. Thompson5.2k
0
votes
1
answer
198
views
1
answer
How to set a negative coverage to ZERO
coverage genomicranges written 9 months ago by vanhzh0 • updated 9 months ago by Martin Morgan ♦♦ 19k
1
vote
1
answer
183
views
1
answer
6
votes
0
answers
379
views
5 follow
0
answers
0
votes
2
answers
645
views
2
answers
BH vs BY in p.adjust + FDR interpretation
coverage limma written 10.5 years ago by lemerle@embl.de50 • updated 12 months ago by Gordon Smyth29k
0
votes
1
answer
958
views
1
answer
1
vote
1
answer
517
views
1
answer
Does coverage() split exon spanning RNA-seq reads?
coverage genomicranges genomicalignments written 18 months ago by Jake50 • updated 18 months ago by Martin Morgan ♦♦ 19k
0
votes
2
answers
464
views
2
answers
2
votes
1
answer
273
views
1
answer
Calling coverage on GRanges object yields small negative values
coverage granges written 21 months ago by Anya10 • updated 21 months ago by Hervé Pagès ♦♦ 11k
2
votes
1
answer
579
views
1
answer
Shrink or Expand RLE
coverage granges iranges rle written 21 months ago by gen30 • updated 21 months ago by Martin Morgan ♦♦ 19k
0
votes
2
answers
583
views
2
answers
Error using Bsmooth.tstat due to NAs
coverage bsseq written 2.4 years ago by Guest User12k • updated 22 months ago by parker0
0
votes
0
answers
358
views
0
answers
0
votes
1
answer
659
views
1
answer
"Normalising" GRanges coverage object
coverage go gviz written 2.4 years ago by Aliaksei Holik350 • updated 2.4 years ago by Ryan C. Thompson5.2k
0
votes
0
answers
237
views
0
answers
0
votes
0
answers
292
views
0
answers
0
votes
0
answers
568
views
0
answers
0
votes
1
answer
812
views
1
answer
0
votes
2
answers
433
views
2
answers
mr.edgeR tests in MEDIPS package
coverage medips written 2.7 years ago by Vining, Kelly10 • updated 2.7 years ago by Matthias Lienhard70
0
votes
3
answers
560
views
3
answers
Displaying very deep coverage in Gviz
coverage gviz written 2.7 years ago by Lance Parsons130 • updated 2.7 years ago by florian.hahne@novartis.com1.4k
0
votes
0
answers
213
views
0
answers
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