1
vote
2
answers
48
views
2
answers
0
votes
1
answer
213
views
1
answer
DESeq2 batch effect with and without interaction model
deseq2 R linear model rna-seq design matrix written 3 months ago by gdagstn0 • updated 3 months ago by Michael Love16k
0
votes
2
answers
467
views
2
answers
2
votes
1
answer
161
views
1
answer
complex design for chip-seq analysis
chipseq limma multiple factor design design matrix csaw written 4 months ago by Assa Yeroslaviz1.3k • updated 4 months ago by Aaron Lun18k
1
vote
1
answer
194
views
1
answer
deseq2 correcting for batch effects
deseq2 removebatcheffect() batch effect design matrix written 4 months ago by Assa Yeroslaviz1.3k • updated 4 months ago by Michael Love16k
1
vote
1
answer
386
views
1
answer
DESeq2 design matrix with a single mock and multiple timepoints
deseq2 design matrix written 6 months ago by ap36370 • updated 6 months ago by Michael Love16k
0
votes
1
answer
139
views
1
answer
0
votes
0
answers
147
views
0
answers
0
votes
0
answers
244
views
0
answers
0
votes
1
answer
300
views
1
answer
1
vote
3
answers
460
views
3
answers
7
votes
2
answers
404
views
2
answers
2
votes
1
answer
532
views
1
answer
RNA-seq paired analysis design
limma edger deseq2 design matrix paired samples written 12 months ago by cjmb30 • updated 12 months ago by Gordon Smyth32k
0
votes
1
answer
342
views
1
answer
Design question limma multi variables
limma design matrix written 12 months ago by Stane40 • updated 12 months ago by Aaron Lun18k
2
votes
1
answer
371
views
1
answer
DESeq2 multifactorial design with unpaired individuals
deseq2 design matrix written 13 months ago by fanli.gcb0 • updated 13 months ago by Michael Love16k
1
vote
1
answer
357
views
1
answer
design for edgeR
edger design matrix glmlrt written 14 months ago by simarsidhu250 • updated 14 months ago by Aaron Lun18k
1
vote
2
answers
257
views
2
answers
4
votes
1
answer
289
views
1
answer
Design matrix and contrast for RNA knockdown experiment
limma design matrix contrast matrix written 16 months ago by maltethodberg40 • updated 16 months ago by Aaron Lun18k
2
votes
1
answer
320
views
1
answer
using variable in design formula
deseq2 R design matrix written 18 months ago by igor20 • updated 18 months ago by Michael Love16k
1
vote
1
answer
295
views
1
answer
4
votes
2
answers
313
views
2
answers
0
votes
1
answer
257
views
1
answer
2
votes
1
answer
331
views
1
answer
a complicate scenario for Design Matrix
edger design matrix written 22 months ago by kainblue1000 • updated 22 months ago by Aaron Lun18k
5
votes
3
answers
509
views
3
answers
0
votes
2
answers
321
views
2
answers
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