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2
votes
3
answers
624
views
3
answers
DMRcate results cg ID of significant DMR
dmrcate written 2.4 years ago by Giovanni Calice • 150 • updated 3 months ago by 574233829 • 0
0
votes
0
answers
110
views
0
answers
DMRcate package :How to find the gene associated with coordinate
gene symbol dmrcate coordinate written 3 months ago by 574233829 • 0
2
votes
2
answers
150
views
2
answers
Bumphunting for longitudinal data
minfi bumphunter dmr analysis dmrcate lmer written 5 months ago by Ashlynn • 0 • updated 5 months ago by Tim Peters • 80
0
votes
2
answers
343
views
2
answers
error in champ.DMR using DMRcate (v2.8.3)
champ dmrcate illuminahumanmethylationepicanno.ilm10b2.hg19 written 16 months ago by mia • 0 • updated 16 months ago by Yuan Tian • 80
1
vote
1
answer
377
views
1
answer
DMRcate results file ordered by genomic location and not Stouffer p-val?
methylation dmrcate written 16 months ago by Ellen O • 0 • updated 16 months ago by Tim Peters • 80
1
vote
1
answer
384
views
1
answer
coef in dmrcate
bumphunter methylation dmrcate epic written 18 months ago by yoursbassanio • 0 • updated 18 months ago by James W. MacDonald ♦ 48k
0
votes
3
answers
736
views
3
answers
bug in cpg.annotate() and DMR.plot: bad defaults for what and arraytype arguments
minfi dmrcate written 19 months ago by Jenny Drnevich • 1.9k • updated 18 months ago by Tim Peters • 80
0
votes
3
answers
707
views
3
answers
minfi, lumi, methylumi, DMRcate installation error
lumi methylumi minfi illuminahumanmethylation450kanno.ilmn12.hg19 dmrcate written 19 months ago by poojitha.stemcell • 0 • updated 19 months ago by Tim Peters • 80
0
votes
1
answer
457
views
1
answer
DMRcate: Scaling factor for bandwidth
dmr analysis dmrcate dmr written 20 months ago by alexandria.andrayas • 0 • updated 20 months ago by Tim Peters • 80
0
votes
1
answer
414
views
1
answer
DMRcate DMR.plot Turn Off Group Means
visualization dmrcate written 21 months ago by csugai • 0 • updated 21 months ago by Tim Peters • 80
1
vote
1
answer
298
views
1
answer
DMRcate error in extractCoords function
software error dmrcate extractranges written 21 months ago by Xavier Pastor • 10 • updated 21 months ago by Tim Peters • 80
0
votes
1
answer
255
views
1
answer
Betacutoff is not used in dmrcate function.
dmrcate written 21 months ago by icobo • 0 • updated 21 months ago by Tim Peters • 80
0
votes
6
answers
6.4k
views
6
answers
dmrcate(): Error in `$<-.data.frame`(`*tmp*`, "sig", value = logical(0)) : replacement has 0 rows, data has 1963
dmrcate written 24 months ago by ew17 • 0 • updated 21 months ago by Tim Peters • 80
1
vote
2
answers
524
views
2
answers
DMRcate results meanpvals
dmrcate written 2.3 years ago by Giovanni Calice • 150 • updated 2.3 years ago by Tim Peters • 80
0
votes
1
answer
281
views
1
answer
conflicts in chromosome number
dmrcate written 2.3 years ago by yuping.zhang • 0 • updated 2.3 years ago by Tim Peters • 80
2
votes
1
answer
611
views
1
answer
DMRcate error: object 'annotated' not found
error dmrcate written 2.8 years ago by Eric Smith • 0 • updated 2.8 years ago by Tim Peters • 80
0
votes
2
answers
805
views
2
answers
DMRcate cpg.annotate error: "Error in data.frame"
dmrcate written 2.9 years ago by par.larsson • 0
2
votes
1
answer
821
views
1
answer
DMRcate cpg.annotate error
design matrix dmrcate written 2.9 years ago by Giovanni Calice • 150 • updated 2.9 years ago by Tim Peters • 80
1
vote
1
answer
567
views
1
answer
DMRcate: phenotype variable with multiple levels
dmr analysis dmrcate written 3.2 years ago by irini.liampa • 0 • updated 3.2 years ago by andrew.j.skelton73 • 310
0
votes
1
answer
1.3k
views
1
answer
DMRcate: incorporating covariates to find DMRs in methylation data?
limma illimina 450k methylation dmrcate written 3.5 years ago by Brian Smith • 120 • updated 3.5 years ago by Tim Peters • 80
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