4
votes
2
answers
93
views
2
answers
4
votes
3
answers
111
views
3
answers
1
vote
1
answer
131
views
1
answer
Strange distribution of logFC
rnaseq edger deseq2 differential gene expression written 10 days ago by Claire0 • updated 9 days ago by Aaron Lun17k
1
vote
1
answer
70
views
1
answer
DGE analysis with TMM and gene length normalized data.
edger deseq2 tmm normalised values written 10 days ago by Saumya0010 • updated 10 days ago by Aaron Lun17k
0
votes
1
answer
120
views
1
answer
0
votes
0
answers
125
views
0
answers
0
votes
1
answer
153
views
1
answer
4
votes
2
answers
164
views
2
answers
14
votes
6
answers
1.5k
views
10 follow
6
answers
Diffbind: edgeR or DESeq2 ?
edger diffbind deseq2 medip-seq written 20 months ago by florian.noack60 • updated 22 days ago by Rory Stark2.1k
2
votes
2
answers
110
views
2
answers
edgeR - problem with glmQLFTest()
edger written 24 days ago by david.powell0 • updated 23 days ago by Gordon Smyth32k
0
votes
1
answer
72
views
1
answer
glmQLFTest, coef=2:4, decideTestDGE not working
edger dge coef written 28 days ago by rebeccajane930 • updated 28 days ago by Aaron Lun17k
0
votes
1
answer
79
views
1
answer
Running model separately for each cell line or as the same model?
rnaseq limma edger deseq2 written 28 days ago by Ahdee40 • updated 28 days ago by k.vitting.seerup10
2
votes
1
answer
113
views
1
answer
edgeR: PValue, adjusted PValue, FDR
edger written 29 days ago by zhxiaokang0 • updated 29 days ago by James W. MacDonald45k
6
votes
2
answers
147
views
2
answers
4
votes
1
answer
133
views
1
answer
4
votes
1
answer
147
views
1
answer
edgeR cpm filter
edger independent filtering multiple factor design cpm written 5 weeks ago by teshome.dagnem0 • updated 5 weeks ago by Gordon Smyth32k
0
votes
1
answer
85
views
1
answer
4
votes
3
answers
144
views
3
answers
Error in plot.new() : figure margins too large
edger written 6 weeks ago by mictadlo0 • updated 5 weeks ago by Gordon Smyth32k
3
votes
1
answer
100
views
1
answer
saving a plot as png and also showing inside Rstudio
edger ggplot2 written 6 weeks ago by mictadlo0 • updated 6 weeks ago by Aaron Lun17k
5
votes
1
answer
91
views
1
answer
How is it possible to get a legend outside plotMDS?
edger ggplot2 written 6 weeks ago by mictadlo0 • updated 6 weeks ago by James W. MacDonald45k
3
votes
1
answer
138
views
1
answer
0
votes
1
answer
89
views
1
answer
1
vote
1
answer
89
views
1
answer
How to filter glmTreat results by a false discovery rate (FDR) of 0.05
edger written 6 weeks ago by mictadlo0 • updated 6 weeks ago by Aaron Lun17k
0
votes
1
answer
180
views
1
answer
2
votes
1
answer
81
views
1
answer
adding a description column to glmTreat output
edger written 6 weeks ago by mictadlo0 • updated 6 weeks ago by Aaron Lun17k
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