3
votes
1
answer
59
views
1
answer
How to calculate average log2 CPM with batch effect?
limma edger cpm written 7 days ago by b.nota300 • updated 6 days ago by Aaron Lun21k
6
votes
1
answer
71
views
1
answer
2
votes
1
answer
58
views
1
answer
edgeR with related individuals?
edger design matrix related written 16 days ago by joanna.l.kelley0 • updated 16 days ago by James W. MacDonald48k
3
votes
1
answer
61
views
1
answer
1
vote
1
answer
60
views
1
answer
EdgeR between unequal group sizes?
rnaseq edger differential gene expression written 17 days ago by rina0 • updated 17 days ago by Gordon Smyth35k
1
vote
1
answer
56
views
1
answer
EDASeq, RUVSeq and edgeR together
edger edaseq ruvseq written 21 days ago by zoppoli pietro10 • updated 20 days ago by davide risso750
1
vote
1
answer
70
views
1
answer
2
votes
1
answer
107
views
1
answer
1
vote
1
answer
79
views
1
answer
3
votes
1
answer
102
views
1
answer
use only lib size as normalizing factor in edgeR
edger written 25 days ago by Udi Landau30 • updated 25 days ago by Aaron Lun21k
2
votes
1
answer
113
views
1
answer
1
vote
1
answer
115
views
1
answer
2
votes
1
answer
161
views
1
answer
edgeR: design matrix for methylation analysis
edger methylation written 3 months ago by sgld0 • updated 4 weeks ago by Gordon Smyth35k
1
vote
1
answer
94
views
1
answer
4
votes
1
answer
98
views
1
answer
8
votes
1
answer
73
views
1
answer
2
votes
1
answer
98
views
1
answer
EdgeR analysis batch effect
edger differential gene expression written 5 weeks ago by rfenouil0 • updated 5 weeks ago by Aaron Lun21k
6
votes
1
answer
73
views
5 follow
1
answer
1
vote
1
answer
100
views
1
answer
3
votes
1
answer
104
views
1
answer
0
votes
1
answer
98
views
1
answer
RNA-seq unbalanced batch effect correction
rnaseq edger batch effect written 6 weeks ago by sckinta0 • updated 6 weeks ago by James W. MacDonald48k
3
votes
1
answer
75
views
1
answer
3
votes
2
answers
126
views
2
answers
1
vote
1
answer
109
views
1
answer
EdgeR filtering, gene expression, cpm cutoff
edger tutorial written 7 weeks ago by ilovesuperheroes19930 • updated 7 weeks ago by Hotz, Hans-Rudolf400
3
votes
1
answer
173
views
1
answer
Error in glmFit.default() : y is not a numeric matrix
edger written 7 weeks ago by borpano20 • updated 7 weeks ago by Aaron Lun21k
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