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4
votes
1
answer
112
views
1
answer
The ShortRead package does not handle quality score '~' (Q=93) found in PacBio fastq files
shortread fastq pacbio written 8 weeks ago by benjamin.j.callahan • 40 • updated 8 weeks ago by Martin Morgan ♦♦ 21k
0
votes
1
answer
507
views
1
answer
How to check that the reads in two fastq files are in the same order
shortread fastq written 16 months ago by Frocha • 10 • updated 16 months ago by James W. MacDonald ♦ 46k
0
votes
0
answers
296
views
0
answers
How to start CrispRVariants with fastq file starting point
R fastq crispr written 17 months ago by kfburbach • 0
2
votes
1
answer
276
views
1
answer
Uniting SRA Data into a single file
sradb R fastq sra written 17 months ago by grecoandreauni • 0 • updated 17 months ago by Martin Morgan ♦♦ 21k
0
votes
2
answers
478
views
2
answers
subset from fastq file
fastq written 19 months ago by K • 40
0
votes
1
answer
557
views
1
answer
Error downloading using SRAdb
sradb ftp fastq written 2.1 years ago by yugi1001 • 0 • updated 2.1 years ago by Jack Zhu • 170
6
votes
3
answers
815
views
3
answers
.fastq to .txt conversion for EdgeR package and merging two paired end sequence files
normalization edger fastq tmm txt written 2.4 years ago by hamidrezarazzaghian • 0
1
vote
1
answer
588
views
1
answer
need help manipulating fastq file
fastq written 2.6 years ago by K • 40 • updated 2.6 years ago by Martin Morgan ♦♦ 21k
2
votes
1
answer
1.9k
views
1
answer
merge fastq.gz in R? (or in Windows?)
rnaseq bioconductor fastq written 2.8 years ago by mk.applebee • 0
0
votes
2
answers
1.1k
views
2
answers
Using RNA-Seq Workflow using Real Life FASTQ data - and Mouse Reference Genome
deseq2 fastq deseqdataset rnaseqgene reference genome written 3.0 years ago by greg.mulhearn • 0 • updated 2.9 years ago by James W. MacDonald ♦ 46k
2
votes
3
answers
572
views
3
answers
ShortRead trim sequence at specific position
shortread fastq written 3.0 years ago by danova_fr • 20
3
votes
1
answer
1.1k
views
1
answer
fastqSampler and writeFastq in shortread package
shortread fastq write written 3.2 years ago by francesca.defilippis • 40 • updated 3.2 years ago by Martin Morgan ♦♦ 21k
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