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2
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1
answer
228
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1
answer
msmsTests, NA values in test.results output
proteomics fdr msmstests written 4 months ago by laural710 • 0 • updated 4 months ago by Laurent Gatto ♦ 1.1k
3
votes
1
answer
235
views
1
answer
p.adjust function fdr and BH
fdr bh written 7 months ago by zhang.jianhai • 0 • updated 7 months ago by Gordon Smyth ♦ 36k
3
votes
1
answer
222
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1
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Does Fold change cutoff changes the FDR value using glmTreat function in edgeR?
edger R bioconductor fdr diffferential expression written 8 months ago by Biologist • 70 • updated 8 months ago by James W. MacDonald ♦ 49k
0
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1
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254
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1
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Defining subsets for FDR correction
deseq2 fdr ihw written 8 months ago by sven.schenk • 10 • updated 8 months ago by Michael Love ♦ 22k
40
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3
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3.5k
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3
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Are published RNA seq data analyses often wrong in calculating p-values and FDR?
deseq rna-seq fdr p-value written 21 months ago by yjiangnan • 10 • updated 14 months ago by Wade Davis • 60
5
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2
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1.2k
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2
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Volcanoplot with limma - RAW P-values or Adj.P-Values
limma volcanoplot fdr written 19 months ago by tcalvo • 30 • updated 19 months ago by Wolfgang Huber ♦ 13k
0
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1
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262
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1
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EdgeR dispersion and FDR
rnaseq edger fdr written 20 months ago by dsarbashis • 0 • updated 20 months ago by Aaron Lun • 22k
2
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1
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802
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1
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Limma toptable interpretation check
microarray limma fdr results p-value written 21 months ago by bhgyu • 30 • updated 21 months ago by Aaron Lun • 22k
0
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1
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481
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1
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FUNCTIONAL ENRICHMENT ANALYSIS
fdr genecodis3 written 21 months ago by nia • 10 • updated 21 months ago by Robert Castelo • 2.3k
2
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1
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378
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1
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fdr score for degs
fdr deg written 21 months ago by nia • 10 • updated 21 months ago by svlachavas • 640
1
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2
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1.3k
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2
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Inspection and Correction of p-values in DESeq2 pipeline by Bernd
deseq2 fdr fdrtool written 24 months ago by deena • 10 • updated 23 months ago by Bernd Klaus • 530
1
vote
1
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654
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1
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Question about testing main factors and doing FDR correction in a multiple-factor design in DESeq2.
deseq2 fdr multiple factor design fdrtool written 2.0 years ago by marieke • 0 • updated 2.0 years ago by Michael Love ♦ 22k
2
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1
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2.0k
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1
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edgeR: How is FDR calculated for logFC? (False Discovery Rate)
edger statistics bioconductor differential gene expression fdr written 2.2 years ago by jol.espinoz • 20
0
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1
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423
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1
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Change the FDR in DEXSeq
fdr padj written 2.3 years ago by arom2 • 0 • updated 2.3 years ago by Jakub • 30
31
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2
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32k
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15 follow
2
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conceptual question about FDR, FDR adjusted p-value and q-value
qvalue fdr written 6.2 years ago by Jack Luo • 390 • updated 2.4 years ago by Gordon Smyth ♦ 36k
0
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1
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799
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1
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DESeq with hierarchical FDR correction
deseq2 fdr written 3.5 years ago by liam.philip.shaw • 0 • updated 3.5 years ago by Michael Love ♦ 22k
2
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9
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1.0k
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9
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BiSeq trimClusters FDR.loc confusion
biseq data fdr results written 3.9 years ago by mnaymik • 10
3
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2
answers
803
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2
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help! new to R! Detection p value cut off
microarray fdr p values written 4.0 years ago by a • 0
1
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3
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1.2k
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3
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strange FDR distribution for RNA-seq sample with edgeR
edger rna-seq fdr written 4.2 years ago by OLIVER, DAVID • 10 • updated 4.2 years ago by Gordon Smyth ♦ 36k
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