1
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93
views
1
answer
featureCounts using 3'UTR as genome
R featurecounts written 6 days ago by joangibert140 • updated 6 days ago by James W. MacDonald44k
2
votes
2
answers
210
views
2
answers
Calculating rpkm from counts data?
edger R featurecounts rpkm tpm written 7 days ago by ghk0 • updated 7 days ago by kristoffer.vittingseerup20
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1
answer
158
views
1
answer
0
votes
0
answers
128
views
0
answers
0
votes
1
answer
94
views
1
answer
0
votes
0
answers
97
views
0
answers
0
votes
0
answers
184
views
0
answers
0
votes
0
answers
158
views
0
answers
3
votes
1
answer
203
views
1
answer
0
votes
1
answer
200
views
1
answer
FeatureCounts --read2pos option
featurecounts written 4 months ago by Glihm0 • updated 4 months ago by Wei Shi2.6k
0
votes
0
answers
143
views
0
answers
0
votes
1
answer
185
views
1
answer
IRanges object from count matrix
rnaseq iranges genomicranges featurecounts counts written 6 months ago by Assa Yeroslaviz1.3k • updated 6 months ago by Hervé Pagès ♦♦ 12k
1
vote
2
answers
281
views
2
answers
6
votes
3
answers
213
views
3
answers
2
votes
1
answer
252
views
1
answer
featureCounts Parameters for Exon Junctions
rsubread featurecounts written 9 months ago by Dario Strbenac1.3k • updated 9 months ago by Wei Shi2.6k
0
votes
1
answer
257
views
1
answer
How featureCounts define the gene length
rnaseq rsubread featurecounts written 10 months ago by niuyw0 • updated 10 months ago by Gordon Smyth31k
0
votes
0
answers
247
views
0
answers
2
votes
1
answer
214
views
1
answer
featureCounts to RangedSummarizedExperiment
featurecounts windowcounts written 12 months ago by karl.nordstrom0 • updated 12 months ago by Aaron Lun15k
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1
answer
225
views
1
answer
2
votes
1
answer
318
views
1
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3
votes
1
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363
views
1
answer
4
votes
2
answers
311
views
2
answers
2
votes
2
answers
1.1k
views
2
answers
Hisat2 vs featureCounts summary statistics
featurecounts rna-seq mapping hisat2 written 15 months ago by Koen Van den Berge80 • updated 15 months ago by Wei Shi2.6k
3
votes
1
answer
353
views
1
answer
read counts of paired end reads for DESeq2 analysis
deseq featurecounts paired written 15 months ago by tszn19840 • updated 15 months ago by Steve Lianoglou12k
0
votes
1
answer
261
views
1
answer
negative value for minOverlap parameter
rsubread featurecounts minoverlap written 16 months ago by c.merce0 • updated 16 months ago by Wei Shi2.6k
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