4
votes
1
answer
352
views
1
answer
5
votes
1
answer
229
views
1
answer
1
vote
1
answer
211
views
1
answer
diffHiC with no biological replicates?
deseq glm diffhic estimate dispersion value no replicates written 7 months ago by hwick110 • updated 7 months ago by Aaron Lun17k
1
vote
1
answer
233
views
1
answer
1
vote
1
answer
243
views
1
answer
Treating 2 coefficients as the same group in Limma
limma glm written 13 months ago by Ahdee30 • updated 13 months ago by James W. MacDonald45k
3
votes
1
answer
429
views
1
answer
QLF or LRT in edgeR for paired sample designs?
edger glm paired samples ql f-test lr-test written 15 months ago by Akira Imamoto0 • updated 15 months ago by Aaron Lun17k
11
votes
3
answers
387
views
3
answers
Fit a multinomial to RNA-seq count data
regression limma voom glm multinomial written 16 months ago by rubi70 • updated 16 months ago by Robert Castelo2.0k
2
votes
1
answer
652
views
1
answer
edgeR: exactTest, glmFIt or glmQLFit approach?
rnaseq edger glm glmfit written 16 months ago by alessia.donato0 • updated 16 months ago by Aaron Lun17k
9
votes
1
answer
423
views
1
answer
1
vote
0
answers
434
views
0
answers
edgeR, DE between 4 different samples
edger differential gene expression glm tutorial written 19 months ago by wendy_110 • updated 19 months ago by James W. MacDonald45k
11
votes
2
answers
1.3k
views
5 follow
2
answers
1
vote
1
answer
567
views
1
answer
edgeR GLM fitted values
rnaseq classification edger glm written 21 months ago by Mattia10 • updated 21 months ago by Aaron Lun17k
0
votes
2
answers
346
views
2
answers
edgeR GLM design question: contrasts
edger glm written 22 months ago by jwi0
2
votes
1
answer
699
views
1
answer
order of covariates for GLM with edgeR
edger differential expression glm covariate batch effect written 23 months ago by aec30 • updated 23 months ago by Gordon Smyth32k
11
votes
4
answers
757
views
6 follow
4
answers
2
votes
5
answers
624
views
5
answers
6
votes
3
answers
821
views
6 follow
3
answers
edgeR vs glm.nb
edger glm written 2.3 years ago by dongamit12320
7
votes
1
answer
1.1k
views
1
answer
Multiple Comparisons EdgeR
edger anova glm multiple comparisons written 2.4 years ago by chickenchamp410 • updated 2.4 years ago by Ryan C. Thompson6.1k
10
votes
1
answer
1.6k
views
1
answer
GLM Likelihood ratio test
rnaseq edger glm written 2.7 years ago by ygowtha0 • updated 2.7 years ago by Gordon Smyth32k
6
votes
2
answers
501
views
2
answers
help for designing a multifactorial GLM framework edgeR
edger glm written 3.0 years ago by damiano.porcelli0 • updated 3.0 years ago by Aaron Lun17k
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