4
votes
1
answer
157
views
1
answer
2
votes
1
answer
195
views
1
answer
4
votes
1
answer
429
views
1
answer
GLM model on time course analysis and removing the outliers in Deseq2
timecourse deseq2 glm written 13 months ago by rahel1435010 • updated 3 months ago by Michael Love16k
5
votes
1
answer
260
views
1
answer
1
vote
1
answer
267
views
1
answer
diffHiC with no biological replicates?
deseq glm diffhic estimate dispersion value no replicates written 11 months ago by hwick110 • updated 11 months ago by Aaron Lun18k
1
vote
1
answer
288
views
1
answer
1
vote
1
answer
271
views
1
answer
Treating 2 coefficients as the same group in Limma
limma glm written 16 months ago by Ahdee40 • updated 16 months ago by James W. MacDonald45k
3
votes
1
answer
554
views
1
answer
QLF or LRT in edgeR for paired sample designs?
edger glm paired samples ql f-test lr-test written 18 months ago by Akira Imamoto0 • updated 18 months ago by Aaron Lun18k
11
votes
3
answers
432
views
3
answers
Fit a multinomial to RNA-seq count data
regression limma voom glm multinomial written 19 months ago by rubi80 • updated 19 months ago by Robert Castelo2.1k
2
votes
1
answer
791
views
1
answer
edgeR: exactTest, glmFIt or glmQLFit approach?
rnaseq edger glm glmfit written 19 months ago by alessia.donato0 • updated 19 months ago by Aaron Lun18k
9
votes
1
answer
477
views
1
answer
1
vote
0
answers
499
views
0
answers
edgeR, DE between 4 different samples
edger differential gene expression glm tutorial written 22 months ago by wendy_110 • updated 22 months ago by James W. MacDonald45k
12
votes
2
answers
1.6k
views
6 follow
2
answers
1
vote
1
answer
668
views
1
answer
edgeR GLM fitted values
rnaseq classification edger glm written 2.0 years ago by Mattia10 • updated 2.0 years ago by Aaron Lun18k
0
votes
2
answers
390
views
2
answers
edgeR GLM design question: contrasts
edger glm written 2.1 years ago by jwi0
2
votes
1
answer
809
views
1
answer
order of covariates for GLM with edgeR
edger differential expression glm covariate batch effect written 2.2 years ago by aec30 • updated 2.2 years ago by Gordon Smyth32k
11
votes
4
answers
884
views
6 follow
4
answers
2
votes
5
answers
703
views
5
answers
6
votes
3
answers
915
views
6 follow
3
answers
edgeR vs glm.nb
edger glm written 2.6 years ago by dongamit12320
7
votes
1
answer
1.4k
views
1
answer
Multiple Comparisons EdgeR
edger anova glm multiple comparisons written 2.7 years ago by chickenchamp410 • updated 2.7 years ago by Ryan C. Thompson6.3k
10
votes
1
answer
1.9k
views
1
answer
GLM Likelihood ratio test
rnaseq edger glm written 3.0 years ago by ygowtha0 • updated 3.0 years ago by Gordon Smyth32k
6
votes
2
answers
523
views
2
answers
help for designing a multifactorial GLM framework edgeR
edger glm written 3.2 years ago by damiano.porcelli0 • updated 3.2 years ago by Aaron Lun18k
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