4
votes
1
answer
204
views
1
answer
2
votes
1
answer
260
views
1
answer
4
votes
1
answer
494
views
1
answer
GLM model on time course analysis and removing the outliers in Deseq2
timecourse deseq2 glm written 16 months ago by rahel1435010 • updated 6 months ago by Michael Love17k
5
votes
1
answer
294
views
1
answer
2
votes
1
answer
309
views
1
answer
diffHiC with no biological replicates?
deseq glm diffhic estimate dispersion value no replicates written 14 months ago by hwick120 • updated 14 months ago by Aaron Lun19k
1
vote
1
answer
344
views
1
answer
1
vote
1
answer
294
views
1
answer
Treating 2 coefficients as the same group in Limma
limma glm written 19 months ago by Ahdee40 • updated 19 months ago by James W. MacDonald46k
3
votes
1
answer
718
views
1
answer
QLF or LRT in edgeR for paired sample designs?
edger glm paired samples ql f-test lr-test written 21 months ago by Akira Imamoto0 • updated 21 months ago by Aaron Lun19k
11
votes
3
answers
485
views
3
answers
Fit a multinomial to RNA-seq count data
regression limma voom glm multinomial written 22 months ago by rubi90 • updated 22 months ago by Robert Castelo2.1k
2
votes
1
answer
961
views
1
answer
edgeR: exactTest, glmFIt or glmQLFit approach?
rnaseq edger glm glmfit written 22 months ago by alessia.donato0 • updated 22 months ago by Aaron Lun19k
9
votes
1
answer
521
views
1
answer
1
vote
0
answers
576
views
0
answers
edgeR, DE between 4 different samples
edger differential gene expression glm tutorial written 2.1 years ago by wendy_110 • updated 2.1 years ago by James W. MacDonald46k
12
votes
2
answers
1.9k
views
6 follow
2
answers
1
vote
1
answer
770
views
1
answer
edgeR GLM fitted values
rnaseq classification edger glm written 2.3 years ago by Mattia10 • updated 2.3 years ago by Aaron Lun19k
0
votes
2
answers
421
views
2
answers
edgeR GLM design question: contrasts
edger glm written 2.3 years ago by jwi0
2
votes
1
answer
900
views
1
answer
order of covariates for GLM with edgeR
edger differential expression glm covariate batch effect written 2.4 years ago by aec40 • updated 2.4 years ago by Gordon Smyth33k
11
votes
4
answers
1.0k
views
6 follow
4
answers
2
votes
5
answers
763
views
5
answers
6
votes
3
answers
1.0k
views
6 follow
3
answers
edgeR vs glm.nb
edger glm written 2.8 years ago by dongamit12320
7
votes
1
answer
1.6k
views
1
answer
Multiple Comparisons EdgeR
edger anova glm multiple comparisons written 3.0 years ago by chickenchamp410 • updated 3.0 years ago by Ryan C. Thompson6.7k
10
votes
1
answer
2.2k
views
1
answer
GLM Likelihood ratio test
rnaseq edger glm written 3.2 years ago by ygowtha0 • updated 3.2 years ago by Gordon Smyth33k
6
votes
2
answers
550
views
2
answers
help for designing a multifactorial GLM framework edgeR
edger glm written 3.5 years ago by damiano.porcelli0 • updated 3.5 years ago by Aaron Lun19k
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