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Creation
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Votes
3
votes
9
replies
1.5k
views
Create object "Go3AnnDbBimap" and include it in a org.Xx.eg.db package to use with goProfiles and goTools
goprofiles
AnnotationForge
Bimap
GO
6.5 years ago • updated 6.4 years ago
artur
• 80
0
votes
0
replies
1.1k
views
Ontology lack in goProfiles : no BP or CC just MF
GO
goProfiles
GO
goProfiles
6.9 years ago
Arnaud Mounier
• 40
0
votes
0
replies
780
views
error while using goProfiles package on arabidopsis entrez gene IDs
GO
Organism
goProfiles
GO
Organism
goProfiles
7.5 years ago
Marc Carlson
♦ 7.2k
0
votes
0
replies
1.3k
views
error while using goProfiles package on arabidopsis entrez gene IDs
goProfiles
goProfiles
7.5 years ago
Guest User
♦ 12k
0
votes
2
replies
578
views
Gene Ontologies exploration
goProfiles
GeneAnswers
goProfiles
GeneAnswers
8.1 years ago
Jose M Garcia Manteiga
• 310
• updated 8.1 years ago
Marc Carlson
♦ 7.2k
0
votes
2
replies
518
views
Profiles
GO
goProfiles
GO
goProfiles
8.4 years ago
Guest User
♦ 12k
• updated 8.4 years ago
Steve Lianoglou
13k
0
votes
2
replies
566
views
How to make my own GO.db?
GO
goProfiles
GO
goProfiles
10.7 years ago
Xiaohui Wu
• 280
• updated 10.7 years ago
Marc Carlson
♦ 7.2k
0
votes
1
reply
683
views
How to cluster genes based on their GO term in Arabidopsis?
GO
Cancer
Prostate
goProfiles
GO
Cancer
Prostate
goProfiles
10.7 years ago
Xiaohui Wu
• 280
• updated 10.7 years ago
James W. MacDonald
56k
0
votes
0
replies
434
views
Problem about using "goProfiles"
Category
goProfiles
Category
goProfiles
10.7 years ago
wei tie
• 30
0
votes
0
replies
570
views
How to compare GO results
Annotation
GO
topGO
goProfiles
Annotation
GO
topGO
goProfiles
11.5 years ago
Johannes Hanson
• 30
0
votes
0
replies
495
views
plotProfiles (goProfiles) and bitmap
GO
graph
goProfiles
GO
graph
goProfiles
11.7 years ago
Jean-Pierre Desvignes
• 60
0
votes
8
replies
752
views
PreProcess and Limma 'done'. What directions now?
goProfiles
goProfiles
11.7 years ago
Massimo Pinto
• 390
• updated 11.7 years ago
Steve Lianoglou
13k
0
votes
2
replies
617
views
namespace error with goProfiles package
GO
mouse4302
goProfiles
GO
mouse4302
goProfiles
12.7 years ago
Straubhaar, Juerg
• 300
• updated 12.7 years ago
Alex Sanchez
• 20
13 results • Page
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Answer: Can you colour dendrogram branch clusters in pheatmap?
by
Kevin Blighe
2.5k
Hi, you should be able to do this by first creating the dendrogram and hclust object via CRAN's *dendextend* package, and then supplying …
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It may be hard to tell in this plot because PC1 explains so much of the difference. The variability is not so stark as in other cases, and …
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Hi, It seems that the manufacturer (Illumina) simply moved the target locus, which often occurs across array designs. In the case of c…
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1) "counts(dds,normalized=TRUE)" returns counts that are corrected for library size and transcript length. Yes, and the indication is th…
Comment: DiffBind dba.report() output: Is "concentration" normalized?
by
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♦ 3.6k
As I understand it, you have two contrasts that share one group of samples. You expect the concentrations reported for the shared group to …
Votes
Comment: DEseq2 results
Answer: Diffbind principal components
Comment: Removing rows (countData) from a DESeq Object
Comment: Removing rows (countData) from a DESeq Object
Answer: Using group instead of interaction term on a custom edited matrix
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