0
votes
2
answers
29
views
2
answers
Issues in generating workable rank file for GSEA
gseabase deseq2 gsea pre-ranked gsea written 9 hours ago by csijst0 • updated 7 hours ago by Michael Love18k
2
votes
1
answer
117
views
1
answer
convert Gene collection to gene list for camera function
limma gseabase written 3 months ago by Seymoo0 • updated 3 months ago by James W. MacDonald46k
2
votes
1
answer
163
views
1
answer
1
vote
1
answer
241
views
1
answer
0
votes
0
answers
178
views
0
answers
0
votes
2
answers
430
views
2
answers
2
votes
1
answer
242
views
1
answer
2
votes
2
answers
296
views
2
answers
0
votes
1
answer
304
views
1
answer
Question on GeneSetCollection in GSEABase
gseabase geneset written 17 months ago by siajunren0 • updated 17 months ago by Martin Morgan ♦♦ 21k
1
vote
1
answer
339
views
1
answer
GSEABase getGmt() fails when more than 1 line contains duplicates
gseabase bug written 21 months ago by dondelelcaro10 • updated 21 months ago by Martin Morgan ♦♦ 21k
9
votes
3
answers
1.4k
views
3
answers
GSEA-like enrichment score calculation
gseabase gsea enrichment analysis written 2.0 years ago by Matthias Z.20 • updated 2.0 years ago by Gordon Smyth33k
0
votes
3
answers
1.1k
views
3
answers
Creating custom geneset
gseabase written 2.3 years ago by pbachali0
8
votes
2
answers
2.2k
views
2
answers
Gene set enrichment analysis
topgo gseabase gostat gsea written 3.5 years ago by kaushal Raj Chaudhary10 • updated 3.5 years ago by Levi Waldron450
0
votes
1
answer
684
views
1
answer
Running the GSEA algorithm
microarray genesetenrichment pgsea gseabase gsri seqgsea written 4.2 years ago by Leif Väremo70 • updated 4.2 years ago by Steve Lianoglou12k
0
votes
2
answers
1.4k
views
2
answers
Running the GSEA algorithm
infrastructure pgsea gseabase seqgsea written 4.2 years ago by enricoferrero560 • updated 4.2 years ago by Julian Gehring1.3k
0
votes
0
answers
341
views
0
answers
0
votes
0
answers
442
views
0
answers
0
votes
1
answer
462
views
1
answer
conversion of geneset species ID
gseabase written 6.8 years ago by Iain Gallagher910 • updated 6.8 years ago by Martin Morgan ♦♦ 21k
0
votes
1
answer
417
views
1
answer
creating a UniprotIdentifier within GSEABase
annotation cancer hgu95av2 convert gseabase written 6.9 years ago by Mark Cowley910 • updated 6.9 years ago by Martin Morgan ♦♦ 21k
0
votes
0
answers
736
views
0
answers
0
votes
1
answer
676
views
1
answer
Help with GSEA package
hu6800 cdf genefilter multtest affy gcrma siggenes annaffy gseabase written 7.5 years ago by Jillian Rowe20 • updated 7.5 years ago by Martin Morgan ♦♦ 21k
0
votes
0
answers
415
views
0
answers
0
votes
1
answer
429
views
1
answer
GSEABase and Broad Inst Sets
annotation hgu133plus2 hgu95av2 gseabase written 8.0 years ago by Iain Gallagher910 • updated 8.0 years ago by Martin Morgan ♦♦ 21k
0
votes
2
answers
535
views
2
answers
0
votes
2
answers
400
views
2
answers
GSEAbase and limma
limma gseabase written 8.6 years ago by Javier Pérez Florido830 • updated 8.6 years ago by Gordon Smyth33k
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