0
votes
0
answers
227
views
0
answers
0
votes
2
answers
155
views
2
answers
Issues in generating workable rank file for GSEA
gseabase deseq2 gsea pre-ranked gsea written 6 months ago by csijst0 • updated 6 months ago by Michael Love20k
2
votes
1
answer
226
views
1
answer
convert Gene collection to gene list for camera function
limma gseabase written 10 months ago by Seymoo0 • updated 10 months ago by James W. MacDonald48k
2
votes
1
answer
254
views
1
answer
1
vote
1
answer
352
views
1
answer
0
votes
0
answers
252
views
0
answers
0
votes
2
answers
529
views
2
answers
2
votes
1
answer
303
views
1
answer
2
votes
2
answers
360
views
2
answers
0
votes
1
answer
386
views
1
answer
Question on GeneSetCollection in GSEABase
gseabase geneset written 23 months ago by siajunren0 • updated 23 months ago by Martin Morgan ♦♦ 22k
1
vote
1
answer
420
views
1
answer
GSEABase getGmt() fails when more than 1 line contains duplicates
gseabase bug written 2.2 years ago by dondelelcaro10 • updated 2.2 years ago by Martin Morgan ♦♦ 22k
9
votes
3
answers
2.0k
views
3
answers
GSEA-like enrichment score calculation
gseabase gsea enrichment analysis written 2.5 years ago by Matthias Z.20 • updated 2.5 years ago by Gordon Smyth35k
0
votes
3
answers
1.4k
views
3
answers
Creating custom geneset
gseabase written 2.8 years ago by pbachali10
8
votes
2
answers
2.6k
views
2
answers
Gene set enrichment analysis
topgo gseabase gostat gsea written 4.0 years ago by kaushal Raj Chaudhary10 • updated 4.0 years ago by Levi Waldron820
0
votes
1
answer
763
views
1
answer
Running the GSEA algorithm
microarray genesetenrichment pgsea gseabase gsri seqgsea written 4.7 years ago by Leif Väremo70 • updated 4.7 years ago by Steve Lianoglou12k
0
votes
2
answers
1.6k
views
2
answers
Running the GSEA algorithm
infrastructure pgsea gseabase seqgsea written 4.7 years ago by enricoferrero570 • updated 4.7 years ago by Julian Gehring1.3k
0
votes
0
answers
400
views
0
answers
0
votes
0
answers
491
views
0
answers
0
votes
1
answer
570
views
1
answer
conversion of geneset species ID
gseabase written 7.3 years ago by Iain Gallagher920 • updated 7.3 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
486
views
1
answer
creating a UniprotIdentifier within GSEABase
annotation cancer hgu95av2 convert gseabase written 7.4 years ago by Mark Cowley910 • updated 7.4 years ago by Martin Morgan ♦♦ 22k
0
votes
0
answers
850
views
0
answers
0
votes
1
answer
765
views
1
answer
Help with GSEA package
hu6800 cdf genefilter multtest affy gcrma siggenes annaffy gseabase written 8.0 years ago by Jillian Rowe20 • updated 8.0 years ago by Martin Morgan ♦♦ 22k
0
votes
0
answers
462
views
0
answers
0
votes
1
answer
494
views
1
answer
GSEABase and Broad Inst Sets
annotation hgu133plus2 hgu95av2 gseabase written 8.5 years ago by Iain Gallagher920 • updated 8.5 years ago by Martin Morgan ♦♦ 22k
0
votes
2
answers
604
views
2
answers
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