0
votes
0
answers
154
views
0
answers
0
votes
2
answers
111
views
2
answers
Issues in generating workable rank file for GSEA
gseabase deseq2 gsea pre-ranked gsea written 4 months ago by csijst0 • updated 4 months ago by Michael Love19k
2
votes
1
answer
187
views
1
answer
convert Gene collection to gene list for camera function
limma gseabase written 7 months ago by Seymoo0 • updated 7 months ago by James W. MacDonald48k
2
votes
1
answer
225
views
1
answer
1
vote
1
answer
309
views
1
answer
0
votes
0
answers
224
views
0
answers
0
votes
2
answers
491
views
2
answers
2
votes
1
answer
282
views
1
answer
2
votes
2
answers
338
views
2
answers
0
votes
1
answer
355
views
1
answer
Question on GeneSetCollection in GSEABase
gseabase geneset written 21 months ago by siajunren0 • updated 21 months ago by Martin Morgan ♦♦ 22k
1
vote
1
answer
391
views
1
answer
GSEABase getGmt() fails when more than 1 line contains duplicates
gseabase bug written 2.1 years ago by dondelelcaro10 • updated 2.1 years ago by Martin Morgan ♦♦ 22k
9
votes
3
answers
1.8k
views
3
answers
GSEA-like enrichment score calculation
gseabase gsea enrichment analysis written 2.3 years ago by Matthias Z.20 • updated 2.3 years ago by Gordon Smyth35k
0
votes
3
answers
1.3k
views
3
answers
Creating custom geneset
gseabase written 2.7 years ago by pbachali0
8
votes
2
answers
2.5k
views
2
answers
Gene set enrichment analysis
topgo gseabase gostat gsea written 3.9 years ago by kaushal Raj Chaudhary10 • updated 3.9 years ago by Levi Waldron730
0
votes
1
answer
741
views
1
answer
Running the GSEA algorithm
microarray genesetenrichment pgsea gseabase gsri seqgsea written 4.6 years ago by Leif Väremo70 • updated 4.6 years ago by Steve Lianoglou12k
0
votes
2
answers
1.5k
views
2
answers
Running the GSEA algorithm
infrastructure pgsea gseabase seqgsea written 4.6 years ago by enricoferrero570 • updated 4.6 years ago by Julian Gehring1.3k
0
votes
0
answers
371
views
0
answers
0
votes
0
answers
474
views
0
answers
0
votes
1
answer
523
views
1
answer
conversion of geneset species ID
gseabase written 7.1 years ago by Iain Gallagher910 • updated 7.1 years ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
452
views
1
answer
creating a UniprotIdentifier within GSEABase
annotation cancer hgu95av2 convert gseabase written 7.2 years ago by Mark Cowley910 • updated 7.2 years ago by Martin Morgan ♦♦ 22k
0
votes
0
answers
804
views
0
answers
0
votes
1
answer
731
views
1
answer
Help with GSEA package
hu6800 cdf genefilter multtest affy gcrma siggenes annaffy gseabase written 7.9 years ago by Jillian Rowe20 • updated 7.9 years ago by Martin Morgan ♦♦ 22k
0
votes
0
answers
443
views
0
answers
0
votes
1
answer
471
views
1
answer
GSEABase and Broad Inst Sets
annotation hgu133plus2 hgu95av2 gseabase written 8.3 years ago by Iain Gallagher910 • updated 8.3 years ago by Martin Morgan ♦♦ 22k
0
votes
2
answers
579
views
2
answers
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