Showing: limma • reset
Search
1
vote
1
answer
42
views
1
answer
limma: treating multiple variables as random effects in duplicateCorrelation()
limma duplicatecorrelation written 13 hours ago by K.E. • 0 • updated 13 hours ago by Gordon Smyth ♦ 37k
0
votes
1
answer
87
views
1
answer
limma random effects and multi level experiments
limma multi-level random effect written 4 days ago by David Rengel • 70 • updated 1 day ago by Gordon Smyth ♦ 37k
0
votes
1
answer
47
views
1
answer
How to regress phenotype ~ gene + covars in limma?
microarray limma R gene expression written 4 days ago by anon20955 • 0 • updated 4 days ago by Gordon Smyth ♦ 37k
1
vote
1
answer
48
views
1
answer
How do I creat an expressionset if there is no GDS listed on the GEO database?
microarray limma geoquery written 5 days ago by pgurkirat • 0 • updated 5 days ago by James W. MacDonald ♦ 49k
2
votes
0
answers
704
views
0
answers
Limma - decideTests - separate/nestedF questions
microarray limma written 12.0 years ago by Gordon Smyth ♦ 37k
0
votes
1
answer
335
views
1
answer
Limma - decideTests - separate/nestedF questions
limma written 12.1 years ago by Misha Kapushesky • 130 • updated 8 days ago by Gordon Smyth ♦ 37k
3
votes
2
answers
158
views
2
answers
Help with Limma F.p.value from eBayes
limma written 11 days ago by rs0412 • 0 • updated 8 days ago by Gordon Smyth ♦ 37k
1
vote
1
answer
78
views
1
answer
limma with paired samples and a continuous variable
limma written 11 days ago by gil.hornung • 0 • updated 10 days ago by Aaron Lun • 23k
1
vote
1
answer
63
views
1
answer
What's the best way to use "semi" technical replicates with biological replicates?
limma technical replicates paired analysis biological replicates written 11 days ago by paul.alto • 30 • updated 10 days ago by Aaron Lun • 23k
1
vote
1
answer
74
views
1
answer
How to normalize RNA-seq when 50% genes are DE? (TMM)
rnaseq normalization limma differential expression tmm written 13 days ago by natalia_lt • 0 • updated 13 days ago by James W. MacDonald ♦ 49k
2
votes
1
answer
60
views
1
answer
LIMMA how to model unidentified source of covariate
limma covariate written 15 days ago by scheran02 • 0 • updated 15 days ago by Gordon Smyth ♦ 37k
1
vote
1
answer
56
views
1
answer
Normalizing expression across complex array designs
limma written 18 days ago by shaybenelazar • 0 • updated 18 days ago by James W. MacDonald ♦ 49k
2
votes
1
answer
92
views
1
answer
moderated p-values limma style from std.error, df, estimate data.
limma written 19 days ago by wewolski • 10
3
votes
1
answer
86
views
1
answer
HTA 2.0 Differential expression analysis - design question
annotation affy limma hta written 19 days ago by RV • 10 • updated 19 days ago by James W. MacDonald ♦ 49k
1
vote
2
answers
48
views
2
answers
barcodeplot how to increase the font size
limma written 19 days ago by Vivek.b • 100 • updated 19 days ago by Gordon Smyth ♦ 37k
1
vote
1
answer
202
views
1
answer
Differential expression of GSVA Enrichment Scores - voomWithQualityWeights and lmfit
limma gsva lmfit voomwithqualityweights written 6 months ago by SB • 0
0
votes
2
answers
293
views
2
answers
GSVA and Limma for differential expression of gene sets
limma gsva written 7 months ago by SB • 0
5
votes
1
answer
127
views
1
answer
Differential expression on GSVA scores using LIMMA
limma gsva written 20 days ago by Anja Rockstroh • 20 • updated 20 days ago by Robert Castelo • 2.3k
0
votes
0
answers
88
views
0
answers
usage of topGO after limma
microarray limma topgo written 24 days ago by I.V. Lynn • 0 • updated 24 days ago by Gordon Smyth ♦ 37k
2
votes
1
answer
87
views
1
answer
HOW TO USE LIMMA PACKAGE
microarray limma written 27 days ago by singhjay • 10 • updated 24 days ago by Aaron Lun • 23k
5
votes
1
answer
151
views
1
answer
Association analysis between gene expression and Phenotype
limma rna singlecell written 26 days ago by hrishi27n • 20 • updated 24 days ago by Aaron Lun • 23k
0
votes
1
answer
72
views
1
answer
Differentially expressed genes in rice affymetrix data and annotation
microarray annotation affy limma differentially expresed genes written 25 days ago by pratikshasharma47 • 0 • updated 25 days ago by James W. MacDonald ♦ 49k
3
votes
1
answer
152
views
1
answer
Experimental design RNAseq differential expression
limma edger design batch contrasts written 4 weeks ago by Pietro • 20 • updated 4 weeks ago by Aaron Lun • 23k
2
votes
1
answer
59
views
1
answer
Modeling with 'discontinuous' continuous variables, or continuous variables with gaps
limma continuous variable linear modeling written 4 weeks ago by smurray • 10 • updated 4 weeks ago by Aaron Lun • 23k
0
votes
0
answers
150
views
0
answers
How to analyze RNAseq data with multiple treatment groups and each subject has pre and post-treatment measures using deseq2/edger/limma?
limma edger deseq2 tutorial written 5 weeks ago by wwu222 • 0 • updated 5 weeks ago by Michael Love ♦ 23k
<prev • 3,498 results • page 1 of 140 • next >
Recent...
Replies
Votes
Awards • All »
Locations • All »
  • United States, 1 minute ago
  • European Union, 7 minutes ago
  • Denali, 29 minutes ago
Content
Help
Access
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by Biostar version 16.09
Traffic: 184 users visited in the last hour