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Comment: Joining different datasets and analyzing using the group-specific condition effe
by
jason.chai
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0
Thank you very much. I had read that and wondered if I used the recommendation in DESeq vignette, I would lose the pairing between groups? …
Comment: Questions about bacon QC and correction on EWAS results
by
sup0903
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0
This is qq plot and histogram generated before bacon correction
![enter image description here][1]
![enter image description here][2]
…
Comment: Ensembl site unresponsive via biomaRt
by
sebastianenewell
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0
> I think this is an unrelated issue. The original post includes the
> message Error: 'curl_parse_url' is not an exported object from
> 'na…
Comment: Development of MSstat workflow to analyze DIA time series data
by
Gordon Smyth
53k
Are there any other explanatory factors or covariates in your experiment other than time point? Do you have biological replicates at each t…
Answer: Question about the filterByExpr function inputs in edgeR
by
Gordon Smyth
53k
Either of these choices is perfectly acceptable from an edgeR analysis point of view, it is more to do with which is more relevant for your…
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