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R packages for differential expression analysis of raw data from arraystar microarrays
microarray microrna lncrna raw data mrna written 17 months ago by ntagaras • 0 • updated 17 months ago by Axel Klenk • 920
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Agilent microrna microaaray
microrna analysis agilent microarrays written 21 months ago by arisarkar88 • 0
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gene set enrichment and pathway analysis of gene expression datas
microarray microrna written 2.4 years ago by n3da.karami • 0
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Error while normalizing [miRNA-1_0] Affymetrix miRNA Array cel files
microarray microrna cdfinfo written 2.7 years ago by arisarkar88 • 0 • updated 2.7 years ago by James W. MacDonald ♦ 50k
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Combining TLDA cards for normalization
normalization microrna htqpcr written 2.8 years ago by jamie_jabalee • 0
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Error in file(file, "rt") : cannot open the connection - Using ExiMir Package
microrna eximir R written 3.1 years ago by 31sharmajittu1991 • 0
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normalized read count per group from edgeR
edger microrna written 3.2 years ago by manoharankumar01 • 0
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800
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edgeR_robust: where are moderately expressed genes?
rnaseq edger microrna written 3.5 years ago by marek_koter • 0 • updated 3.5 years ago by Aaron Lun • 23k
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Setting a good lfcThreshold-value in DESeq2 to find stably expressed microRNAs
microrna ffpe deseq2 stable expression lfcthreshold written 3.6 years ago by mariakarand • 10 • updated 3.6 years ago by Michael Love ♦ 23k
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How to find significantly stably expressed miRNA with DESeq2 DE results
microrna deseq2 differential expression stable expression written 3.6 years ago by mariakarand • 10
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RUVseq for microRNAs
microrna ruvseq ruv written 3.8 years ago by sergio.espeso-gil • 0
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The number of features of Expression Set for Affymetrix miRNA 4.0 data preprocsessed by oligo package
microarray preprocessing affy oligo microrna written 3.9 years ago by enthelesia • 0 • updated 3.9 years ago by James W. MacDonald ♦ 50k
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help with array based microRNA data analysis
limma microrna written 5.3 years ago by Abhishek Pratap • 170 • updated 5.3 years ago by Paul Geeleher • 1.3k
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mirDeep2 edgeR analysis
sequencing mirna microrna written 5.8 years ago by Flores Torres, Mariana • 10 • updated 5.8 years ago by Ryan C. Thompson ♦ 7.3k
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Chip Definition File (CDF) for Affymetrix microRNA Arrays 3.0
cdf microrna written 6.1 years ago by K. Weigelt • 10 • updated 6.1 years ago by James W. MacDonald ♦ 50k
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identifying drosophila miRNA targets
mirna drosophila2 probe affy convert affycoretools microrna written 6.1 years ago by Fiona • 70
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identifying drosophila miRNA targets
mirna affy microrna written 6.1 years ago by Fiona • 70 • updated 6.1 years ago by James W. MacDonald ♦ 50k
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AgiMicroRna for new Agilent Chip format
microarray go limma process microrna agimicrorna written 6.2 years ago by Gordon Smyth ♦ 37k
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miRNA analysis advice
mirna microarray microrna written 6.2 years ago by Fiona • 70 • updated 6.2 years ago by James W. MacDonald ♦ 50k
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taqman versions
microrna written 6.6 years ago by marco fabbri • 320 • updated 6.6 years ago by James F. Reid • 120
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847
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get al microRNA target sites for a given gene
microrna written 6.6 years ago by Javier Pérez Florido • 840 • updated 6.6 years ago by James W. MacDonald ♦ 50k
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Should AgiMicroRna and GeneSpring quantile normalisation be the same ?
normalization genespring microrna agimicrorna written 6.8 years ago by Seyit Ali KAYIS • 30 • updated 6.8 years ago by Paul Geeleher • 1.3k
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Help with choice of normalization
microarray normalization go microrna written 6.8 years ago by Ali Mohammadian • 290
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any good R package to scan microRNA target?
microrna written 7.2 years ago by wang peter • 2.0k • updated 7.2 years ago by Steve Lianoglou ♦ 12k
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extracting sequence from a genome
mirna microrna written 7.2 years ago by Iain Gallagher • 930 • updated 7.2 years ago by Tim Triche • 4.2k
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