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0
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1
answer
236
views
1
answer
R packages for differential expression analysis of raw data from arraystar microarrays
microarray microrna lncrna raw data mrna written 9 months ago by ntagaras • 0 • updated 9 months ago by Axel Klenk • 920
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1
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476
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1
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Agilent microrna microaaray
microrna analysis agilent microarrays written 12 months ago by arisarkar88 • 0
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0
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279
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gene set enrichment and pathway analysis of gene expression datas
microarray microrna written 21 months ago by n3da.karami • 0
0
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1
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445
views
1
answer
Error while normalizing [miRNA-1_0] Affymetrix miRNA Array cel files
microarray microrna cdfinfo written 2.0 years ago by arisarkar88 • 0 • updated 2.0 years ago by James W. MacDonald ♦ 47k
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290
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Combining TLDA cards for normalization
normalization microrna htqpcr written 2.1 years ago by jamie_jabalee • 0
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Error in file(file, "rt") : cannot open the connection - Using ExiMir Package
microrna eximir R written 2.4 years ago by 31sharmajittu1991 • 0
2
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2
answers
614
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2
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normalized read count per group from edgeR
edger microrna written 2.5 years ago by manoharankumar01 • 0
2
votes
1
answer
677
views
1
answer
edgeR_robust: where are moderately expressed genes?
rnaseq edger microrna written 2.9 years ago by marek_koter • 0 • updated 2.9 years ago by Aaron Lun • 21k
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1
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1.0k
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1
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Setting a good lfcThreshold-value in DESeq2 to find stably expressed microRNAs
microrna ffpe deseq2 stable expression lfcthreshold written 2.9 years ago by mariakarand • 10 • updated 2.9 years ago by Michael Love ♦ 19k
3
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3
answers
918
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3
answers
How to find significantly stably expressed miRNA with DESeq2 DE results
microrna deseq2 differential expression stable expression written 2.9 years ago by mariakarand • 10
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3
answers
757
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3
answers
RUVseq for microRNAs
microrna ruvseq ruv written 3.2 years ago by sergio.espeso-gil • 0
0
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1
answer
671
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1
answer
The number of features of Expression Set for Affymetrix miRNA 4.0 data preprocsessed by oligo package
microarray preprocessing affy oligo microrna written 3.2 years ago by enthelesia • 0 • updated 3.2 years ago by James W. MacDonald ♦ 47k
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1
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451
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1
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help with array based microRNA data analysis
limma microrna written 4.7 years ago by Abhishek Pratap • 170 • updated 4.7 years ago by Paul Geeleher • 1.3k
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1
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1.4k
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1
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mirDeep2 edgeR analysis
sequencing mirna microrna written 5.1 years ago by Flores Torres, Mariana • 10 • updated 5.1 years ago by Ryan C. Thompson ♦ 6.8k
0
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2
answers
915
views
2
answers
Chip Definition File (CDF) for Affymetrix microRNA Arrays 3.0
cdf microrna written 5.4 years ago by K. Weigelt • 10 • updated 5.4 years ago by James W. MacDonald ♦ 47k
0
votes
0
answers
541
views
0
answers
identifying drosophila miRNA targets
mirna drosophila2 probe affy convert affycoretools microrna written 5.5 years ago by Fiona • 70
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1
answer
510
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1
answer
identifying drosophila miRNA targets
mirna affy microrna written 5.5 years ago by Fiona • 70 • updated 5.5 years ago by James W. MacDonald ♦ 47k
0
votes
0
answers
755
views
0
answers
AgiMicroRna for new Agilent Chip format
microarray go limma process microrna agimicrorna written 5.6 years ago by Gordon Smyth ♦ 35k
0
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1
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426
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1
answer
miRNA analysis advice
mirna microarray microrna written 5.6 years ago by Fiona • 70 • updated 5.6 years ago by James W. MacDonald ♦ 47k
0
votes
1
answer
326
views
1
answer
taqman versions
microrna written 5.9 years ago by marco fabbri • 320 • updated 5.9 years ago by James F. Reid • 120
0
votes
1
answer
741
views
1
answer
get al microRNA target sites for a given gene
microrna written 5.9 years ago by Javier Pérez Florido • 830 • updated 5.9 years ago by James W. MacDonald ♦ 47k
0
votes
1
answer
728
views
1
answer
Should AgiMicroRna and GeneSpring quantile normalisation be the same ?
normalization genespring microrna agimicrorna written 6.1 years ago by Seyit Ali KAYIS • 30 • updated 6.1 years ago by Paul Geeleher • 1.3k
0
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383
views
0
answers
Help with choice of normalization
microarray normalization go microrna written 6.1 years ago by Ali Mohammadian • 290
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1
answer
560
views
1
answer
any good R package to scan microRNA target?
microrna written 6.5 years ago by wang peter • 2.0k • updated 6.5 years ago by Steve Lianoglou ♦ 12k
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2.9k
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1
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extracting sequence from a genome
mirna microrna written 6.5 years ago by Iain Gallagher • 910 • updated 6.5 years ago by Tim Triche • 4.2k
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