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Comment: Help with Error in DiffBind
by
Chris
• 0
Thank you for your reply! dba.count(bParallel=FALSE) Error: DBA object missing! So I try to use this: dba(DBA,mask, minOverlap=…
Answer: Access modalities in h5 files to extract expression and atac data from 10xh5
by
James W. MacDonald
62k
This support site is intended to help people with questions about Bioconductor packages, and `Signac` is not a Bioconductor package. You co…
Comment: Sudden error with KEGG analysis using gometh
by
James W. MacDonald
62k
For KEGG, yes. You previously couldn't get results, and now you can, so by definition I would expect differences. As for GO, the only chang…
Comment: Sudden error with KEGG analysis using gometh
by
pedro-marra
▴ 10
I updated the packages that generate the KEGG tables (and also GO tables) and the tables were really different from what I had previously g…
Comment: Sudden error with KEGG analysis using gometh
by
pedro-marra
▴ 10
I updated the packages that generate the KEGG tables (and also GO tables) and the tables were really different from what I had previously g…
Votes
Comment: Help with Error in DiffBind
GSVA: questions about the bootstrap p-value
Comment: Multifactorial Design for DESEQ2
Answer: Multifactorial Design for DESEQ2
Use scran's normalization by deconvolution for each individual sample or over all samples
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