Showing: phyloseqreset
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Phyloseq to DESeq2
phyloseq deseq2 written 10 months ago by staffordvigors0 • updated 10 months ago by Michael Love26k
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Invalid class DESeqDataSet object with Phyloseq
phyloseq deseq2 written 16 months ago by amgodogma10 • updated 16 months ago by Michael Love26k
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Install package phyloseq
phyloseq installation written 21 months ago by layeb0 • updated 21 months ago by Martin Morgan ♦♦ 24k
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tip_glom and annotations?
annotation phyloseq ggtree treeio tip_glom written 22 months ago by werdnus0 • updated 22 months ago by Guangchuang Yu1.1k
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Cannot read Biom file
phyloseq R biomformat written 2.1 years ago by channen12210 • updated 2.1 years ago by Axel Klenk940
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DESeq2 iterative size factor normalization did not converge
microbiome phyloseq deseq2 written 2.3 years ago by couchc0 • updated 2.3 years ago by Michael Love26k
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phyloseq heatmap blank after multiple package updates
phyloseq heatmap written 2.3 years ago by newmanss0 • updated 2.3 years ago by Wolfgang Huber13k
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Phyloseq to DESeq2 with multiple variables
phyloseq deseq2 multiple time points written 2.4 years ago by campbell870 • updated 2.4 years ago by Michael Love26k
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DESeq2 in phyloseq
phyloseq deseq2 written 2.8 years ago by sarahmacdonald860
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Controlling colours assigned to order in DeSeq2 plot in phyloseq
phyloseq ggplot2 color written 2.8 years ago by sarahmacdonald860 • updated 2.8 years ago by Michael Love26k
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rlogTransformation vs getVarianceStabilizedData
phyloseq deseq2 R written 3.0 years ago by fabian.roger0810 • updated 3.0 years ago by Michael Love26k
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phyloseq biom json format conversion needed to hdf5 format for qiime
phyloseq hdf5 qiime biom json written 3.1 years ago by newmanss0 • updated 3.1 years ago by Bernd Fischer540
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