0
votes
0
answers
51
views
0
answers
5
votes
0
answers
194
views
0
answers
0
votes
1
answer
161
views
1
answer
0
votes
1
answer
62
views
1
answer
Invalid class DESeqDataSet object with Phyloseq
phyloseq deseq2 written 3 months ago by amgodogma0 • updated 3 months ago by Michael Love20k
0
votes
1
answer
223
views
1
answer
Install package phyloseq
phyloseq installation written 8 months ago by layeb0 • updated 8 months ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
273
views
1
answer
tip_glom and annotations?
annotation phyloseq ggtree treeio tip_glom written 9 months ago by werdnus0 • updated 9 months ago by Guangchuang Yu1.1k
1
vote
1
answer
245
views
1
answer
1
vote
1
answer
488
views
1
answer
Cannot read Biom file
phyloseq R biomformat written 12 months ago by channen12210 • updated 12 months ago by Axel Klenk920
0
votes
0
answers
202
views
0
answers
2
votes
1
answer
493
views
1
answer
DESeq2 iterative size factor normalization did not converge
microbiome phyloseq deseq2 written 14 months ago by couchc0 • updated 14 months ago by Michael Love20k
0
votes
1
answer
373
views
1
answer
phyloseq heatmap blank after multiple package updates
phyloseq heatmap written 14 months ago by newmanss0 • updated 14 months ago by Wolfgang Huber13k
1
vote
1
answer
414
views
1
answer
0
votes
1
answer
311
views
1
answer
Phyloseq to DESeq2 with multiple variables
phyloseq deseq2 multiple time points written 16 months ago by campbell870 • updated 16 months ago by Michael Love20k
0
votes
0
answers
305
views
0
answers
1
vote
0
answers
789
views
0
answers
0
votes
1
answer
571
views
1
answer
2
votes
1
answer
498
views
1
answer
DESeq2 in phyloseq
phyloseq deseq2 written 20 months ago by sarahmacdonald860
0
votes
0
answers
569
views
0
answers
Controlling colours assigned to order in DeSeq2 plot in phyloseq
phyloseq ggplot2 color written 20 months ago by sarahmacdonald860 • updated 20 months ago by Michael Love20k
1
vote
1
answer
380
views
1
answer
rlogTransformation vs getVarianceStabilizedData
phyloseq deseq2 R written 23 months ago by fabian.roger0810 • updated 23 months ago by Michael Love20k
0
votes
0
answers
675
views
0
answers
0
votes
1
answer
638
views
1
answer
phyloseq biom json format conversion needed to hdf5 format for qiime
phyloseq hdf5 qiime biom json written 2.0 years ago by newmanss0 • updated 2.0 years ago by Bernd Fischer540
0
votes
0
answers
668
views
0
answers
0
votes
2
answers
589
views
2
answers
0
votes
0
answers
369
views
0
answers
0
votes
0
answers
273
views
0
answers
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