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1
vote
1
answer
78
views
1
answer
rlog, lfcShrink and vst on gene subset
deseq2 plot subsetting written 13 days ago by giulia.pasquesi • 0 • updated 9 days ago by Michael Love ♦ 18k
0
votes
1
answer
58
views
1
answer
Plotting coverage from bam files
bam plot written 7 weeks ago by gv • 30 • updated 7 weeks ago by James W. MacDonald ♦ 46k
0
votes
0
answers
218
views
0
answers
Adding gene names which are differentially expressed in the plot
edger plot differential gene expression written 7 months ago by fawazfebin • 30
0
votes
0
answers
191
views
0
answers
Plotting DataTrack for non-model organism.
chipseq gviz plot written 9 months ago by anupriyaverma1408 • 0
11
votes
3
answers
666
views
3
answers
edgeR - MDS Plot for Count Data
edger plot mds deg written 10 months ago by baus87 • 0
2
votes
1
answer
177
views
1
answer
Plotting Gene Expression Data From Multiple Batches
microarray plot batch effect written 11 months ago by thyagoleal • 20 • updated 11 months ago by Jenny Drnevich • 1.9k
0
votes
1
answer
277
views
1
answer
Save multiple plots into single pdf from Deseq2 analysis?
plot pdf dev.off written 12 months ago by Bio_Ram • 0 • updated 12 months ago by Wolfgang Huber ♦ 13k
0
votes
2
answers
359
views
2
answers
expression correlation on an ExpressionSet
plot expressionset correlation casecontrol written 16 months ago by alerodriguez • 0 • updated 13 months ago by vulegom • 0
0
votes
0
answers
385
views
0
answers
ConsensusClusterPlus - function "calcICL" - How the samples are ordered in the plots???
consensusclusterplus plot calcicl written 19 months ago by juan-pablo.cerapio-arroyo • 10
1
vote
1
answer
440
views
1
answer
Manhattan plot from ChAMP data
champ plot manhattan plot written 15 months ago by rasmus.rydbirk • 10 • updated 15 months ago by Yuan Tian • 80
1
vote
1
answer
702
views
1
answer
Combining LD matrix plot with SNP and gene data with ggplot / ggbio tracks() function
ggbio bioconductor plot ggplot2 tracks written 17 months ago by oswaldo.lorenzo • 10 • updated 17 months ago by Michael Lawrence ♦ 10.0k
2
votes
1
answer
319
views
1
answer
ggbio tracks () does not allow "call" class in the "main" slot of the function
ggbio plot ggplot2 call written 17 months ago by oswaldo.lorenzo • 10 • updated 17 months ago by Michael Lawrence ♦ 10.0k
1
vote
1
answer
387
views
1
answer
How to show chromosome position and SNP label at the same time in x axis
ggbio genomics plot ggplot2 written 21 months ago by oswaldo.lorenzo • 10
2
votes
2
answers
454
views
2
answers
ggbio tracks() function handling x axis in the wrong way
ggbio genomics plot ggplot2 tracks written 21 months ago by oswaldo.lorenzo • 10
0
votes
0
answers
252
views
0
answers
Plotting False discoveries vs genes selected
plot written 23 months ago by humberto_munoz • 0
4
votes
1
answer
465
views
1
answer
gviz: add horizontal line to DataTrack object
gviz bioconductor plot horizontal line written 23 months ago by silvia.parolo • 10 • updated 23 months ago by florian.hahne@novartis.com • 1.6k
2
votes
1
answer
358
views
5 follow
1
answer
Anyone know how to make a plot like this - I don't even know what it's called.
plot ggplot2 written 24 months ago by clairelsimpson • 10 • updated 24 months ago by WouterDeCoster • 110
0
votes
0
answers
339
views
0
answers
changing the plot type in minet package
minet plot written 2.2 years ago by Angel • 40
1
vote
1
answer
521
views
1
answer
ggplot same data, different plots
plot ggplot2 ggplot written 2.4 years ago by alptaciroglu • 40 • updated 2.4 years ago by James W. MacDonald ♦ 46k
0
votes
0
answers
359
views
0
answers
GenomeGraphs, modify Y axis
biomart genomegraphs plot graphics written 2.8 years ago by koenhendriks89 • 0
1
vote
1
answer
628
views
1
answer
"confint" type in DataTrack function (Gviz)
gviz confidence interval plot written 2.9 years ago by Vinicius Henrique da Silva • 20 • updated 2.9 years ago by florian.hahne@novartis.com • 1.6k
2
votes
1
answer
643
views
1
answer
Ploting with NA values in Gviz (generic function from plot)
graph gviz job na plot written 2.9 years ago by Vinicius Henrique da Silva • 20 • updated 2.9 years ago by James W. MacDonald ♦ 46k
0
votes
1
answer
437
views
1
answer
Ringo Plots Only Partially Made
affy tilingarray ringo starr plot written 2.9 years ago by bruce.moran • 20
0
votes
0
answers
610
views
0
answers
R plot error
graph R bioconductor plot data representation in graphical forms written 3.0 years ago by megha.24may • 0
0
votes
2
answers
868
views
2
answers
Plots and Heat Maps not displaying in RGui Window
plot heatmap deseqdataset rnaseqgene graphical written 3.2 years ago by greg.mulhearn • 0
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