1
vote
1
answer
92
views
1
answer
deseq2 correcting for batch effects
deseq2 removebatcheffect() batch effect design matrix written 5 weeks ago by Assa Yeroslaviz1.3k • updated 5 weeks ago by Michael Love14k
0
votes
1
answer
373
views
1
answer
1
vote
1
answer
481
views
1
answer
1
vote
1
answer
270
views
1
answer
3
votes
2
answers
295
views
2
answers
3
votes
2
answers
917
views
2
answers
Pre-processing of RNA-Seq data for WGCNA and DGE
deseq2 wgcna voom rna-seq removebatcheffect() written 14 months ago by gokce.ouz20 • updated 14 months ago by Peter Langfelder1.3k
11
votes
1
answer
405
views
7 follow
1
answer
How to remove more than two batches in my data-sets
rnaseq limma removebatcheffect() written 16 months ago by yi.huang30 • updated 16 months ago by Gordon Smyth32k
8
votes
3
answers
4.2k
views
7 follow
3
answers
Batch correction in DESeq2
rnaseq deseq2 combat removebatcheffect() batch effect written 23 months ago by AB0 • updated 17 months ago by adam0
2
votes
2
answers
305
views
2
answers
5
votes
1
answer
551
views
1
answer
Is Limma's removeBatchEffect() and log2() commutative?
limma rna-seq removebatcheffect() written 19 months ago by Ekarl210 • updated 19 months ago by Aaron Lun17k
2
votes
1
answer
307
views
1
answer
6
votes
2
answers
1.8k
views
2
answers
Estimating and removing batch effects from rna-seq dataset
rnaseq limma sva removebatcheffect() batch effect written 2.1 years ago by AB0 • updated 2.1 years ago by Jeff Leek490
5
votes
1
answer
1.0k
views
1
answer
voom + removeBatchEffect + gene clustering
clustering limma voom removebatcheffect() batch effect written 2.4 years ago by ale.breschi10 • updated 2.4 years ago by Gordon Smyth32k
2
votes
1
answer
1.2k
views
1
answer
RNA-seq: Batch-free expression values
limma edger removebatcheffect() written 2.9 years ago by Ekarl210 • updated 2.9 years ago by Aaron Lun17k
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