0
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1
answer
66
views
1
answer
limma removeBatchEffect -- strange values in presence of NAs
limma removebatcheffect() written 18 days ago by jf10 • updated 18 days ago by Gordon Smyth34k
1
vote
1
answer
196
views
1
answer
RNA-seq Batch Correction
limma edger rna-seq removebatcheffect() written 5 months ago by cvu0 • updated 5 months ago by Aaron Lun20k
1
vote
0
answers
262
views
0
answers
6
votes
2
answers
889
views
2
answers
Is Limma's removeBatchEffect() and log2() commutative?
limma rna-seq removebatcheffect() written 2.3 years ago by Ekarl220 • updated 5 months ago by alakatos80
0
votes
1
answer
224
views
1
answer
Batch effect removal with Deseq2
limma deseq2 removebatcheffect() batch effect written 7 months ago by lirongrossmann10 • updated 7 months ago by Michael Love18k
1
vote
1
answer
608
views
1
answer
deseq2 correcting for batch effects
deseq2 removebatcheffect() batch effect design matrix written 9 months ago by Assa Yeroslaviz1.4k • updated 9 months ago by Michael Love18k
0
votes
1
answer
454
views
1
answer
1
vote
1
answer
564
views
1
answer
1
vote
1
answer
618
views
1
answer
3
votes
2
answers
411
views
2
answers
4
votes
2
answers
1.6k
views
2
answers
Pre-processing of RNA-Seq data for WGCNA and DGE
deseq2 wgcna voom rna-seq removebatcheffect() written 22 months ago by gokce.ouz30 • updated 22 months ago by Peter Langfelder1.5k
11
votes
1
answer
531
views
7 follow
1
answer
How to remove more than two batches in my data-sets
rnaseq limma removebatcheffect() written 2.0 years ago by yi.huang30 • updated 2.0 years ago by Gordon Smyth34k
10
votes
3
answers
7.7k
views
7 follow
3
answers
Batch correction in DESeq2
rnaseq deseq2 combat removebatcheffect() batch effect written 2.6 years ago by AB10 • updated 2.1 years ago by adam0
2
votes
2
answers
366
views
2
answers
2
votes
1
answer
372
views
1
answer
9
votes
2
answers
2.9k
views
2
answers
Estimating and removing batch effects from rna-seq dataset
rnaseq limma sva removebatcheffect() batch effect written 2.8 years ago by AB10 • updated 2.8 years ago by Jeff Leek520
5
votes
1
answer
1.4k
views
1
answer
voom + removeBatchEffect + gene clustering
clustering limma voom removebatcheffect() batch effect written 3.0 years ago by ale.breschi10 • updated 3.0 years ago by Gordon Smyth34k
2
votes
1
answer
1.5k
views
1
answer
RNA-seq: Batch-free expression values
limma edger removebatcheffect() written 3.6 years ago by Ekarl220 • updated 3.6 years ago by Aaron Lun20k
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