0
votes
1
answer
52
views
1
answer
Failure to cluster SC3
sc3 written 15 days ago by jhopkins0 • updated 8 days ago by Vladimir Kiselev130
1
vote
1
answer
74
views
1
answer
A question about log_transformed
sc3 written 3 months ago by liushang0 • updated 3 months ago by James W. MacDonald48k
0
votes
1
answer
116
views
1
answer
How can I show certain gene's expression in clusters by sc3
sc3 written 4 months ago by qq14934380600 • updated 4 months ago by Vladimir Kiselev130
1
vote
1
answer
153
views
1
answer
Is there a way to pull out the stability index matrix from the SC3 object?
sc3 written 8 months ago by yingzi.zhang10 • updated 8 months ago by Vladimir Kiselev130
0
votes
1
answer
262
views
1
answer
SC3 Package: marker genes and normal genes obtained from featureData
sc3 written 10 months ago by angela.ubn0 • updated 9 months ago by Vladimir Kiselev130
1
vote
1
answer
278
views
1
answer
Batch effect removal before SC3?
batch effect removebatcheffect sc3 written 10 months ago by muad.abdelhay10 • updated 10 months ago by Vladimir Kiselev130
1
vote
2
answers
404
views
2
answers
SC3_estimate_k formatting error?
scater sc3 written 11 months ago by alexandriapinto110 • updated 10 months ago by Vladimir Kiselev130
5
votes
2
answers
815
views
2
answers
Raw count data for SC3 and SingleCellExperiment set problem
scater sc3 singlecellexperiment written 11 months ago by chengyuzou10 • updated 11 months ago by Vladimir Kiselev130
4
votes
1
answer
318
views
1
answer
SC3 gene clusters
single cell tutorial single-cell sc3 written 11 months ago by ahmed.elewa20 • updated 11 months ago by Martin Morgan ♦♦ 22k
1
vote
1
answer
564
views
1
answer
Does SC3 correct counts for gene length?
rna-seq single-cell scater sc3 biclustering written 14 months ago by rmf0 • updated 13 months ago by Vladimir Kiselev130
0
votes
1
answer
739
views
1
answer
Import .mtx file in R
sc3 written 16 months ago by suman705320 • updated 16 months ago by Vladimir Kiselev130
4
votes
1
answer
353
views
1
answer
sc3_plot_expression, colour labels
single-cell sc3 written 16 months ago by cfustero20 • updated 16 months ago by Vladimir Kiselev130
3
votes
1
answer
334
views
1
answer
Sharing SC3_interactive results
shiny single-cell sc3 written 17 months ago by cfustero20 • updated 17 months ago by Vladimir Kiselev130
4
votes
3
answers
620
views
3
answers
using SC3 and scater for bulk-RNAseq
scater sc3 scrnaseq written 19 months ago by Assa Yeroslaviz1.4k • updated 19 months ago by Vladimir Kiselev130
2
votes
1
answer
553
views
1
answer
sc3_prepare function error
single cell single-cell scater sc3 written 20 months ago by Assa Yeroslaviz1.4k • updated 20 months ago by Vladimir Kiselev130
3
votes
1
answer
528
views
1
answer
SC3 tutorial error
sc3 written 23 months ago by Jenn20 • updated 23 months ago by Vladimir Kiselev130
3
votes
1
answer
511
views
1
answer
SC3 with latent variable corrected counts
single cell sc3 written 23 months ago by Mark10 • updated 23 months ago by Vladimir Kiselev130
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