0
votes
0
answers
27
views
0
answers
0
votes
1
answer
86
views
1
answer
Failure to cluster SC3
sc3 written 9 weeks ago by jhopkins0 • updated 8 weeks ago by Vladimir Kiselev130
1
vote
1
answer
95
views
1
answer
A question about log_transformed
sc3 written 5 months ago by liushang0 • updated 5 months ago by James W. MacDonald48k
0
votes
1
answer
135
views
1
answer
How can I show certain gene's expression in clusters by sc3
sc3 written 6 months ago by qq14934380600 • updated 6 months ago by Vladimir Kiselev130
1
vote
1
answer
174
views
1
answer
Is there a way to pull out the stability index matrix from the SC3 object?
sc3 written 10 months ago by yingzi.zhang10 • updated 9 months ago by Vladimir Kiselev130
0
votes
1
answer
283
views
1
answer
SC3 Package: marker genes and normal genes obtained from featureData
sc3 written 11 months ago by angela.ubn0 • updated 11 months ago by Vladimir Kiselev130
1
vote
1
answer
323
views
1
answer
Batch effect removal before SC3?
batch effect removebatcheffect sc3 written 12 months ago by muad.abdelhay10 • updated 12 months ago by Vladimir Kiselev130
1
vote
2
answers
465
views
2
answers
SC3_estimate_k formatting error?
scater sc3 written 12 months ago by alexandriapinto110 • updated 12 months ago by Vladimir Kiselev130
5
votes
2
answers
959
views
2
answers
Raw count data for SC3 and SingleCellExperiment set problem
scater sc3 singlecellexperiment written 13 months ago by chengyuzou10 • updated 13 months ago by Vladimir Kiselev130
4
votes
1
answer
352
views
1
answer
SC3 gene clusters
single cell tutorial single-cell sc3 written 13 months ago by ahmed.elewa20 • updated 13 months ago by Martin Morgan ♦♦ 22k
1
vote
1
answer
587
views
1
answer
Does SC3 correct counts for gene length?
rna-seq single-cell scater sc3 biclustering written 16 months ago by rmf10 • updated 15 months ago by Vladimir Kiselev130
0
votes
1
answer
861
views
1
answer
Import .mtx file in R
sc3 written 18 months ago by suman705320 • updated 18 months ago by Vladimir Kiselev130
4
votes
1
answer
382
views
1
answer
sc3_plot_expression, colour labels
single-cell sc3 written 18 months ago by cfustero20 • updated 18 months ago by Vladimir Kiselev130
3
votes
1
answer
360
views
1
answer
Sharing SC3_interactive results
shiny single-cell sc3 written 19 months ago by cfustero20 • updated 19 months ago by Vladimir Kiselev130
4
votes
3
answers
670
views
3
answers
using SC3 and scater for bulk-RNAseq
scater sc3 scrnaseq written 21 months ago by Assa Yeroslaviz1.4k • updated 21 months ago by Vladimir Kiselev130
2
votes
1
answer
589
views
1
answer
sc3_prepare function error
single cell single-cell scater sc3 written 22 months ago by Assa Yeroslaviz1.4k • updated 22 months ago by Vladimir Kiselev130
3
votes
1
answer
544
views
1
answer
SC3 tutorial error
sc3 written 2.1 years ago by Jenn20 • updated 2.1 years ago by Vladimir Kiselev130
3
votes
1
answer
532
views
1
answer
SC3 with latent variable corrected counts
single cell sc3 written 2.1 years ago by Mark10 • updated 2.1 years ago by Vladimir Kiselev130
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