Showing: shortreadreset
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10 follow
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Solexa fastq files and BLAT
cancer biostrings shortread written 10.2 years ago by Daniel Brewer1.9k • updated 10 weeks ago by Bioconductor Community ♦♦ 0
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error: incorrect number of fields (1) input.bam:1
shortread readaligned written 3 months ago by kspata10 • updated 3 months ago by Martin Morgan ♦♦ 23k
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Remove reads from raw fastq
biostrings shortread written 4 months ago by ferbecneu0 • updated 4 months ago by Gordon Smyth36k
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Should I use legacy functions in ShortRead package?
shortread written 12 months ago by Frocha10 • updated 12 months ago by Martin Morgan ♦♦ 23k
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No BAM option in readAligned from the ShortRead package
shortread nucler bioconductor bam file written 13 months ago by jfgout10 • updated 13 months ago by Dario Strbenac1.4k
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bplapply with ShortRead functions
shortread biocparallel written 13 months ago by Vivek.b90 • updated 13 months ago by Martin Morgan ♦♦ 23k
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525
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strsplit method for DNAStringSet objects
biostrings shortread written 23 months ago by jma199130 • updated 23 months ago by Hervé Pagès ♦♦ 13k
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How to check that the reads in two fastq files are in the same order
shortread fastq written 2.3 years ago by Frocha10 • updated 2.3 years ago by James W. MacDonald49k
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FastqStreamer and qualitytype
shortread written 2.5 years ago by David860
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Shortread convert S4 vector qualityScore to vector
shortread written 2.6 years ago by Radek50 • updated 2.6 years ago by Martin Morgan ♦♦ 23k
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make: *** [ShortRead.so] Error 1
shortread written 2.8 years ago by mictadlo0 • updated 2.8 years ago by Martin Morgan ♦♦ 23k
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Error Raised When Trying To Use pileup()
biostrings shortread hilbertvis rsamtools written 2.8 years ago by travis.m.couture0 • updated 2.8 years ago by Martin Morgan ♦♦ 23k
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ShortRead quality assessment functions (qa and qa2) from ShortReadQ object
shortread written 2.9 years ago by phil.chapman140 • updated 2.9 years ago by Martin Morgan ♦♦ 23k
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Using ShortRead (or other) to trim from pattern match onwards
shortread written 3.0 years ago by chapmandu220 • updated 3.0 years ago by Martin Morgan ♦♦ 23k
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4
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IRanges/ShortRead causing crash?
biostrings iranges shortread written 3.3 years ago by pavitrarc20 • updated 3.3 years ago by Martin Morgan ♦♦ 23k
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ShortRead Error in slot(object, ".srlist")
shortread software error written 3.5 years ago by sbrown360 • updated 3.5 years ago by Martin Morgan ♦♦ 23k
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