Showing: svaseqreset
3
votes
1
answer
233
views
1
answer
Calling svaseq() multiple times
limma edger sva svaseq written 8 months ago by cats_dogs0 • updated 8 months ago by Ryan C. Thompson7.1k
1
vote
1
answer
505
views
1
answer
0
votes
0
answers
271
views
0
answers
1
vote
1
answer
393
views
1
answer
Outputting batch-effect free normalized counts
edaseq ruvseq svaseq written 14 months ago by llo0 • updated 14 months ago by davide risso810
0
votes
0
answers
521
views
0
answers
0
votes
1
answer
641
views
1
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RNASeq fold change analysis after subtraction of contaminating MEF signal
deseq2 svaseq written 17 months ago by gpalidwor0 • updated 17 months ago by Michael Love21k
3
votes
1
answer
510
views
1
answer
Taking surrogate variable into account before running PCA
sva svaseq written 19 months ago by wamiqsaifi0 • updated 19 months ago by Guido Hooiveld2.4k
3
votes
1
answer
1000
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1
answer
(batch) corrections of RNA-seq data: integrating LIMMA and SVA
limma sva svaseq written 23 months ago by Bogdan530 • updated 23 months ago by Aaron Lun22k
2
votes
1
answer
547
views
1
answer
3
votes
2
answers
641
views
2
answers
1
vote
2
answers
1.6k
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2
answers
2
votes
1
answer
704
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1
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Regarding batch effect in Deseq2 package
sva deseq2 svaseq written 2.4 years ago by szenitha0 • updated 2.4 years ago by Michael Love21k
0
votes
1
answer
767
views
1
answer
can we use sva function to estimate artifacts for rna seq data?
sva batcheffectcorrection svaseq written 2.5 years ago by szenitha0 • updated 2.5 years ago by Jeff Leek530
1
vote
2
answers
1.2k
views
2
answers
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