0
votes
0
answers
76
views
0
answers
1
vote
1
answer
115
views
1
answer
Outputting batch-effect free normalized counts
edaseq ruvseq svaseq written 5 weeks ago by llo0 • updated 5 weeks ago by davide risso610
0
votes
0
answers
381
views
0
answers
0
votes
1
answer
469
views
1
answer
RNASeq fold change analysis after subtraction of contaminating MEF signal
deseq2 svaseq written 4 months ago by gpalidwor0 • updated 4 months ago by Michael Love15k
3
votes
1
answer
214
views
1
answer
Taking surrogate variable into account before running PCA
sva svaseq written 6 months ago by wamiqsaifi0 • updated 6 months ago by Guido Hooiveld2.2k
3
votes
1
answer
459
views
1
answer
(batch) corrections of RNA-seq data: integrating LIMMA and SVA
limma sva svaseq written 9 months ago by Bogdan480 • updated 9 months ago by Aaron Lun17k
2
votes
1
answer
305
views
1
answer
3
votes
2
answers
389
views
2
answers
1
vote
2
answers
636
views
2
answers
2
votes
1
answer
425
views
1
answer
Regarding batch effect in Deseq2 package
sva deseq2 svaseq written 15 months ago by szenitha0 • updated 15 months ago by Michael Love15k
0
votes
1
answer
412
views
1
answer
can we use sva function to estimate artifacts for rna seq data?
sva batcheffectcorrection svaseq written 16 months ago by szenitha0 • updated 16 months ago by Jeff Leek490
1
vote
2
answers
683
views
2
answers
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