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14
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Error when trying to preprocessReads() : "Error: logical subscript contains NAs"
systempiper written 11 weeks ago by jsalsager • 40
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runCommandline error - bash: module: command not found
systempiper runcommandline bash written 4 months ago by rj.innet • 0
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136
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Problem running (loading) systemPipeR package after downloading
rnaseq systempiper written 5 months ago by rj.innet • 0
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80
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systemARGS not found
systempiper written 6 months ago by kimberly.dickson • 0
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197
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error: NA counts not permitted
edger systempiper rna-seq written 10 months ago by clarisbaby • 0 • updated 10 months ago by Aaron Lun • 22k
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What R version does systemPipeR runs
R systempiper batchjobs written 17 months ago by tarun2 • 0 • updated 17 months ago by Thomas Girke • 1.7k
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Why all of the logFC are NA in my edgeDF2
edger R systempiper written 23 months ago by xuertowong • 0
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SystemPipeR: alignments with ambiguous pairing were dumped.
rnaseq R systempiper summarizeoverlaps tophat written 2.3 years ago by abass.conteh • 0 • updated 2.3 years ago by Thomas Girke • 1.7k
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540
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Problem with systemPipeR package: run_edgeR or run_DESeq2 functions don't work
systempiper run_edger written 2.4 years ago by alexandr.gopanenko • 20 • updated 2.4 years ago by Thomas Girke • 1.7k
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DESeq2 LRT Error: less than one degree of freedom, perhaps full and reduced models are not in the correct order
deseq2 systempiper tutorial written 2.6 years ago by musa • 10
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SystemPipeR GO term enrichment analysis - filterDEG
systempiper go term written 2.7 years ago by A Gossner • 50
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1
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706
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error when using seeFastqPlot
software error systempiper ggplot2 seefastqplot geom_histogram written 3.1 years ago by setarosd • 0 • updated 3.1 years ago by Thomas Girke • 1.7k
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3
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682
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systemPipeR with DESeq2
deseq2 systempiper written 4.3 years ago by Ugo Borello • 340
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