systempiper Posts

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126

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Why all of the logFC are NA in my edgeDF2

edger R systempiper written 4 months ago by xuertowong • 0

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249

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SystemPipeR: alignments with ambiguous pairing were dumped.

rnaseq R systempiper summarizeoverlaps tophat written 8 months ago by abass.conteh • 0 • updated 8 months ago by Thomas Girke • 1.6k

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245

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Problem with systemPipeR package: run_edgeR or run_DESeq2 functions don't work

systempiper run_edger written 9 months ago by alexandr.gopanenko • 20 • updated 9 months ago by Thomas Girke • 1.6k

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384

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DESeq2 LRT Error: less than one degree of freedom, perhaps full and reduced models are not in the correct order

deseq2 systempiper tutorial written 12 months ago by musa • 10

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257

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SystemPipeR GO term enrichment analysis - filterDEG

systempiper go term written 13 months ago by A Gossner • 50

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403

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error when using seeFastqPlot

software error systempiper ggplot2 seefastqplot geom_histogram written 18 months ago by setarosd • 0 • updated 18 months ago by Thomas Girke • 1.6k

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492

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systemPipeR with DESeq2

deseq2 systempiper written 2.7 years ago by Ugo Borello • 340