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31
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topGO: how to print GO descriptions only when using showSigOfNodes?
topgo written 15 days ago by anton.kratz • 40
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1
answer
61
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1
answer
How do you specify "chip" in printGenes of TopGO for maize data
topgo printgenes written 4 weeks ago by Kaperuza • 0 • updated 4 weeks ago by James W. MacDonald ♦ 47k
3
votes
1
answer
103
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1
answer
DEXUSResult as.data.frame doesn't work well if topGO is loaded
topgo dexus written 5 weeks ago by idavydov • 0 • updated 5 weeks ago by James W. MacDonald ♦ 47k
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47
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TopGOdata Object error
topgo written 10 weeks ago by s1607338 • 0
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83
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topGO enrichment analysis
topgo written 10 weeks ago by prakashpandey1111 • 0
1
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0
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63
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topGO: how to rettrieve (long) GO term description without abbreviating
topgo written 11 weeks ago by al-ash • 10
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1
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60
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1
answer
TopGO ks test using a score different from p-value
topgo go enrichment kolmogorov-smirnov test score ks written 11 weeks ago by eagomezc • 0 • updated 11 weeks ago by Lluís R • 370
1
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0
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125
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topGO (Version: 2.30.1) - weight01 algorithm
rnaseq topgo gene ontology pathway analysis deg written 6 months ago by digrigor • 10
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0
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149
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Using topGO for GO Enrichment on methylation markers (Illumina 450k)
topgo illuminahumanmethylation450k.db written 6 months ago by dusan.petrovic • 0
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0
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210
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topGO error : could not find function "annotationFun"
topgo R written 6 months ago by User • 0
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1
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210
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1
answer
AffyLib query in topGO
affy topgo written 7 months ago by User • 0 • updated 7 months ago by James W. MacDonald ♦ 47k
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0
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176
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0
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Unannotated genes in TopGO
topgo go analysis written 7 months ago by Yvan Wenger • 50
2
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1
answer
156
views
1
answer
TopGO - Incorrect mapping genes to GO terms
go topgo org.mm.eg.db written 7 months ago by lehallib • 0 • updated 7 months ago by James W. MacDonald ♦ 47k
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0
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209
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Error topGO printGenes
topgo written 7 months ago by irving.jgalo23 • 0
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1
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635
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1
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using other ontologies in topGO && building GO.db like database for GO-like ontologies
go topgo written 4.5 years ago by Xin.H • 10 • updated 9 months ago by Yvan Wenger • 50
1
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2
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977
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2
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topGO and font size in the graph plots
topgo written 10.0 years ago by Shankavaram, Uma NIH/NCI [E] • 10 • updated 9 months ago by shaungarnett • 10
0
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2
answers
297
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2
answers
ENSEMBL causing issues replicating previous results
topgo R ensembl written 9 months ago by snguyen268 • 0
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0
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226
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topGO - Extra terms appearing in main analysis and the enrichment test
go topgo gene ontology written 10 months ago by beachboarder900 • 40
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0
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270
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GO analysis under-represented genes and over-represented (enrichment) down-regulated genes
rnaseq go topgo clusterprofiler written 11 months ago by Jack • 0
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0
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276
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How to plot the top_GO result using GOplot?
topgo goplot written 11 months ago by peirinl • 0
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0
answers
233
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Problem in genelist levels when running topGO.
topgo written 11 months ago by peirinl • 0
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1
answer
244
views
1
answer
How to produce png files from printGraph
topgo written 11 months ago by mictadlo • 0 • updated 11 months ago by arendsee • 10
0
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1
answer
691
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1
answer
Error in xy.coords(x, y, xlabel, ylabel, log)
topgo svg written 11 months ago by mictadlo • 0
0
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0
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526
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0
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topGO - missing value where TRUE/FALSE needed
topgo edger written 12 months ago by mictadlo • 0
0
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0
answers
363
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0
answers
how to build gene.pathway data.frame for non-model organism
limma topgo edger kegg dataframe written 12 months ago by mictadlo • 0
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