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27
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0
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topGO analysis runTest: non-numeric argument to binary operator
topgo written 5 days ago by Dave Th. • 0
0
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0
answers
39
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0
answers
topGO: how to print GO descriptions only when using showSigOfNodes?
topgo written 5 weeks ago by anton.kratz • 40
0
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1
answer
77
views
1
answer
How do you specify "chip" in printGenes of TopGO for maize data
topgo printgenes written 8 weeks ago by Kaperuza • 0 • updated 8 weeks ago by James W. MacDonald ♦ 48k
3
votes
1
answer
123
views
1
answer
DEXUSResult as.data.frame doesn't work well if topGO is loaded
topgo dexus written 8 weeks ago by idavydov • 0 • updated 8 weeks ago by James W. MacDonald ♦ 48k
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0
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58
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0
answers
TopGOdata Object error
topgo written 3 months ago by s1607338 • 0
1
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0
answers
95
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0
answers
topGO enrichment analysis
topgo written 3 months ago by prakashpandey1111 • 0
2
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0
answers
91
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0
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topGO: how to rettrieve (long) GO term description without abbreviating
topgo written 3 months ago by al-ash • 20
0
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1
answer
81
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1
answer
TopGO ks test using a score different from p-value
topgo go enrichment kolmogorov-smirnov test score ks written 3 months ago by eagomezc • 0 • updated 3 months ago by Lluís Revilla Sancho • 400
1
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0
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136
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0
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topGO (Version: 2.30.1) - weight01 algorithm
rnaseq topgo gene ontology pathway analysis deg written 7 months ago by digrigor • 10
0
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0
answers
156
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0
answers
Using topGO for GO Enrichment on methylation markers (Illumina 450k)
topgo illuminahumanmethylation450k.db written 7 months ago by dusan.petrovic • 0
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0
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225
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0
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topGO error : could not find function "annotationFun"
topgo R written 7 months ago by User • 0
1
vote
1
answer
245
views
1
answer
AffyLib query in topGO
affy topgo written 7 months ago by User • 0 • updated 7 months ago by James W. MacDonald ♦ 48k
0
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0
answers
188
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0
answers
Unannotated genes in TopGO
topgo go analysis written 8 months ago by Yvan Wenger • 50
2
votes
1
answer
169
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1
answer
TopGO - Incorrect mapping genes to GO terms
go topgo org.mm.eg.db written 8 months ago by lehallib • 0 • updated 8 months ago by James W. MacDonald ♦ 48k
0
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0
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224
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Error topGO printGenes
topgo written 8 months ago by irving.jgalo23 • 0
0
votes
1
answer
653
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1
answer
using other ontologies in topGO && building GO.db like database for GO-like ontologies
go topgo written 4.6 years ago by Xin.H • 10 • updated 9 months ago by Yvan Wenger • 50
1
vote
2
answers
1.0k
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2
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topGO and font size in the graph plots
topgo written 10.0 years ago by Shankavaram, Uma NIH/NCI [E] • 10 • updated 9 months ago by shaungarnett • 10
0
votes
2
answers
313
views
2
answers
ENSEMBL causing issues replicating previous results
topgo R ensembl written 10 months ago by snguyen268 • 0
0
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0
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243
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0
answers
topGO - Extra terms appearing in main analysis and the enrichment test
go topgo gene ontology written 11 months ago by beachboarder900 • 40
0
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0
answers
283
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0
answers
GO analysis under-represented genes and over-represented (enrichment) down-regulated genes
rnaseq go topgo clusterprofiler written 12 months ago by Jack • 0
0
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0
answers
299
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0
answers
How to plot the top_GO result using GOplot?
topgo goplot written 12 months ago by peirinl • 0
0
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0
answers
246
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0
answers
Problem in genelist levels when running topGO.
topgo written 12 months ago by peirinl • 0
0
votes
1
answer
256
views
1
answer
How to produce png files from printGraph
topgo written 12 months ago by mictadlo • 0 • updated 12 months ago by arendsee • 10
0
votes
1
answer
755
views
1
answer
Error in xy.coords(x, y, xlabel, ylabel, log)
topgo svg written 12 months ago by mictadlo • 0
0
votes
0
answers
571
views
0
answers
topGO - missing value where TRUE/FALSE needed
topgo edger written 13 months ago by mictadlo • 0
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