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0
votes
0
answers
24
views
0
answers
TopGOdata Object error
topgo written 7 days ago by s1607338 • 0
1
vote
0
answers
54
views
0
answers
topGO enrichment analysis
topgo written 8 days ago by prakashpandey1111 • 0
1
vote
0
answers
33
views
0
answers
topGO: how to rettrieve (long) GO term description without abbreviating
topgo written 12 days ago by al-ash • 10
0
votes
1
answer
39
views
1
answer
TopGO ks test using a score different from p-value
topgo go enrichment kolmogorov-smirnov test score ks written 13 days ago by eagomezc • 0 • updated 12 days ago by Lluís R • 370
1
vote
0
answers
88
views
0
answers
topGO (Version: 2.30.1) - weight01 algorithm
rnaseq topgo gene ontology pathway analysis deg written 3 months ago by digrigor • 10
0
votes
0
answers
123
views
0
answers
Using topGO for GO Enrichment on methylation markers (Illumina 450k)
topgo illuminahumanmethylation450k.db written 4 months ago by dusan.petrovic • 0
0
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0
answers
166
views
0
answers
topGO error : could not find function "annotationFun"
topgo R written 4 months ago by User • 0
1
vote
1
answer
161
views
1
answer
AffyLib query in topGO
affy topgo written 4 months ago by User • 0 • updated 4 months ago by James W. MacDonald ♦ 46k
0
votes
0
answers
144
views
0
answers
Unannotated genes in TopGO
topgo go analysis written 5 months ago by Yvan Wenger • 50
2
votes
1
answer
128
views
1
answer
TopGO - Incorrect mapping genes to GO terms
go topgo org.mm.eg.db written 5 months ago by lehallib • 0 • updated 5 months ago by James W. MacDonald ♦ 46k
0
votes
0
answers
180
views
0
answers
Error topGO printGenes
topgo written 5 months ago by irving.jgalo23 • 0
0
votes
1
answer
583
views
1
answer
using other ontologies in topGO && building GO.db like database for GO-like ontologies
go topgo written 4.4 years ago by Xin.H • 10 • updated 6 months ago by Yvan Wenger • 50
0
votes
2
answers
896
views
2
answers
topGO and font size in the graph plots
topgo written 9.8 years ago by Shankavaram, Uma NIH/NCI [E] • 10 • updated 6 months ago by shaungarnett • 0
0
votes
2
answers
271
views
2
answers
ENSEMBL causing issues replicating previous results
topgo R ensembl written 7 months ago by snguyen268 • 0
0
votes
0
answers
200
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0
answers
topGO - Extra terms appearing in main analysis and the enrichment test
go topgo gene ontology written 8 months ago by beachboarder900 • 40
0
votes
0
answers
236
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0
answers
GO analysis under-represented genes and over-represented (enrichment) down-regulated genes
rnaseq go topgo clusterprofiler written 9 months ago by Jack • 0
0
votes
0
answers
215
views
0
answers
How to plot the top_GO result using GOplot?
topgo goplot written 9 months ago by peirinl • 0
0
votes
0
answers
204
views
0
answers
Problem in genelist levels when running topGO.
topgo written 9 months ago by peirinl • 0
0
votes
1
answer
202
views
1
answer
How to produce png files from printGraph
topgo written 9 months ago by mictadlo • 0 • updated 9 months ago by arendsee • 10
0
votes
1
answer
565
views
1
answer
Error in xy.coords(x, y, xlabel, ylabel, log)
topgo svg written 9 months ago by mictadlo • 0
0
votes
0
answers
429
views
0
answers
topGO - missing value where TRUE/FALSE needed
topgo edger written 10 months ago by mictadlo • 0
0
votes
0
answers
326
views
0
answers
how to build gene.pathway data.frame for non-model organism
limma topgo edger kegg dataframe written 10 months ago by mictadlo • 0
0
votes
1
answer
497
views
1
answer
How to use topGO and KEGG with de-novo species
limma topgo edger kegg kegga written 10 months ago by mictadlo • 0 • updated 10 months ago by Gordon Smyth ♦ 34k
0
votes
0
answers
377
views
0
answers
TopGO - How to return number of genes associated with each GO term?
topgo written 10 months ago by kleona3 • 0
0
votes
1
answer
459
views
1
answer
selection of interesting genes for a KS test in TopGO
topgo written 11 months ago by l.santiago • 0 • updated 11 months ago by Lluís R • 370
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