0
votes
0
answers
118
views
0
answers
2
votes
1
answer
587
views
1
answer
5
votes
2
answers
235
views
2
answers
extracting Allele Read Counts
rsamtools vcf written 10 months ago by Bogdan480
2
votes
2
answers
319
views
2
answers
Select specific variants from vcf file
vcf written 10 months ago by Adam0 • updated 10 months ago by Martin Morgan ♦♦ 21k
0
votes
0
answers
236
views
0
answers
Error in matrix
vcf bioconductor written 11 months ago by bkauf0
2
votes
0
answers
488
views
0
answers
1
vote
0
answers
448
views
0
answers
4
votes
3
answers
679
views
3
answers
about collapsed and expanded vcf file
vcf written 13 months ago by Bogdan480 • updated 13 months ago by raggieapauly0
2
votes
2
answers
349
views
2
answers
3
votes
1
answer
443
views
1
answer
about the use of subsetByFilter()
vcf written 13 months ago by Bogdan480 • updated 13 months ago by Martin Morgan ♦♦ 21k
1
vote
3
answers
313
views
3
answers
about filtering variants from a VCF file
vcf written 13 months ago by Bogdan480
3
votes
1
answer
277
views
1
answer
CollapsedVCF and ExpandedVCF rownames and vcfs with large ref/alt columns
variantannotation vcf written 14 months ago by Sean Davis21k • updated 14 months ago by Valerie Obenchain ♦♦ 6.4k
0
votes
1
answer
332
views
1
answer
vcfR package vector length error
vcf written 15 months ago by jenniewoo20 • updated 15 months ago by Martin Morgan ♦♦ 21k
0
votes
1
answer
335
views
1
answer
2
votes
2
answers
350
views
2
answers
1
vote
1
answer
301
views
1
answer
Expand annotation on a vcf file
variantannotation vcf written 19 months ago by Dee0 • updated 19 months ago by Michael Lawrence9.9k
0
votes
1
answer
397
views
1
answer
1
vote
1
answer
437
views
1
answer
Genome versions of the VcfFiles from AnnotationHub
annotation annotationhub software error vcf written 22 months ago by sskimb10 • updated 22 months ago by Valerie Obenchain ♦♦ 6.4k
0
votes
0
answers
796
views
0
answers
0
votes
1
answer
605
views
1
answer
vcf postion extract
variantannotation vcf position written 2.1 years ago by 1000G_Q0 • updated 2.1 years ago by Martin Morgan ♦♦ 21k
0
votes
0
answers
887
views
0
answers
2
votes
1
answer
929
views
1
answer
Plot data from VCF using Gviz?
variantannotation gviz vcf written 2.3 years ago by Johannes Rainer1.2k • updated 2.3 years ago by Valerie Obenchain ♦♦ 6.4k
2
votes
1
answer
370
views
1
answer
genotypeToSnpMatrix doesn't handle PL
variantannotation vcf written 2.3 years ago by TimothéeFlutre70 • updated 2.3 years ago by Stephanie M. Gogarten530
3
votes
2
answers
436
views
2
answers
2
votes
1
answer
461
views
1
answer
a filter works alone but not with other filters
variantannotation vcf filtervcf written 2.3 years ago by TimothéeFlutre70 • updated 2.3 years ago by Martin Morgan ♦♦ 21k
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