3
votes
1
answer
55
views
1
answer
Problem when transforming Platypus vcf to VRanges
variantannotation vcf readvcf vranges written 6 weeks ago by david.mas0 • updated 6 weeks ago by Michael Lawrence10k
0
votes
1
answer
39
views
1
answer
comparing 2 long BED files in R in an efficient way
vcf bed written 7 weeks ago by Bogdan490 • updated 7 weeks ago by GENOMIC_region0
2
votes
1
answer
116
views
1
answer
0
votes
1
answer
90
views
1
answer
PureCN use of VCF QUAL column for filtering when column is dot
vcf purecn qual written 3 months ago by twtoal0 • updated 3 months ago by markus.riester90
0
votes
1
answer
145
views
1
answer
VCF file non-SNP germline mutations
snp vcf purecn written 3 months ago by twtoal0 • updated 3 months ago by markus.riester90
0
votes
2
answers
127
views
2
answers
Error converting vcf to gds
snprelate vcf gds written 4 months ago by annat220 • updated 4 months ago by zhengx20
2
votes
1
answer
683
views
1
answer
5
votes
2
answers
361
views
2
answers
extracting Allele Read Counts
rsamtools vcf written 16 months ago by Bogdan490
2
votes
2
answers
506
views
2
answers
Select specific variants from vcf file
vcf written 16 months ago by Adam0 • updated 16 months ago by Martin Morgan ♦♦ 22k
0
votes
0
answers
305
views
0
answers
Error in matrix
vcf bioconductor written 16 months ago by bkauf0
2
votes
0
answers
745
views
0
answers
1
vote
0
answers
671
views
0
answers
4
votes
3
answers
917
views
3
answers
about collapsed and expanded vcf file
vcf written 19 months ago by Bogdan490 • updated 19 months ago by raggieapauly0
2
votes
2
answers
446
views
2
answers
3
votes
1
answer
567
views
1
answer
about the use of subsetByFilter()
vcf written 19 months ago by Bogdan490 • updated 19 months ago by Martin Morgan ♦♦ 22k
1
vote
3
answers
403
views
3
answers
about filtering variants from a VCF file
vcf written 19 months ago by Bogdan490
3
votes
1
answer
316
views
1
answer
CollapsedVCF and ExpandedVCF rownames and vcfs with large ref/alt columns
variantannotation vcf written 20 months ago by Sean Davis21k • updated 20 months ago by Valerie Obenchain ♦♦ 6.6k
0
votes
1
answer
392
views
1
answer
vcfR package vector length error
vcf written 21 months ago by jenniewoo20 • updated 21 months ago by Martin Morgan ♦♦ 22k
0
votes
1
answer
399
views
1
answer
2
votes
2
answers
451
views
2
answers
1
vote
1
answer
364
views
1
answer
Expand annotation on a vcf file
variantannotation vcf written 2.1 years ago by Dee0 • updated 2.1 years ago by Michael Lawrence10k
0
votes
1
answer
530
views
1
answer
1
vote
1
answer
538
views
1
answer
Genome versions of the VcfFiles from AnnotationHub
annotation annotationhub software error vcf written 2.3 years ago by sskimb10 • updated 2.3 years ago by Valerie Obenchain ♦♦ 6.6k
0
votes
0
answers
1.0k
views
0
answers
0
votes
1
answer
765
views
1
answer
vcf postion extract
variantannotation vcf position written 2.6 years ago by 1000G_Q0 • updated 2.6 years ago by Martin Morgan ♦♦ 22k
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