5
votes
2
answers
95
views
2
answers
extracting Allele Read Counts
rsamtools vcf written 7 weeks ago by Bogdan460
2
votes
2
answers
108
views
2
answers
Select specific variants from vcf file
vcf written 7 weeks ago by Adam0 • updated 7 weeks ago by Martin Morgan ♦♦ 19k
0
votes
0
answers
104
views
0
answers
Error in matrix
vcf bioconductor written 8 weeks ago by bkauf0
0
votes
0
answers
144
views
0
answers
1
vote
0
answers
161
views
0
answers
4
votes
3
answers
233
views
3
answers
about collapsed and expanded vcf file
vcf written 4 months ago by Bogdan460 • updated 3 months ago by raggieapauly0
2
votes
2
answers
182
views
2
answers
3
votes
1
answer
159
views
1
answer
about the use of subsetByFilter()
vcf written 4 months ago by Bogdan460 • updated 4 months ago by Martin Morgan ♦♦ 19k
1
vote
3
answers
174
views
3
answers
about filtering variants from a VCF file
vcf written 4 months ago by Bogdan460
3
votes
1
answer
138
views
1
answer
0
votes
1
answer
149
views
1
answer
vcfR package vector length error
vcf written 6 months ago by jenniewoo20 • updated 6 months ago by Martin Morgan ♦♦ 19k
0
votes
1
answer
206
views
1
answer
2
votes
2
answers
203
views
2
answers
1
vote
1
answer
182
views
1
answer
Expand annotation on a vcf file
variantannotation vcf written 10 months ago by Dee0 • updated 10 months ago by Michael Lawrence9.2k
0
votes
1
answer
223
views
1
answer
1
vote
1
answer
286
views
1
answer
Genome versions of the VcfFiles from AnnotationHub
annotation annotationhub software error vcf written 13 months ago by sskimb10 • updated 13 months ago by Valerie Obenchain ♦♦ 6.1k
0
votes
0
answers
517
views
0
answers
0
votes
1
answer
399
views
1
answer
vcf postion extract
variantannotation vcf position written 16 months ago by 1000G_Q0 • updated 16 months ago by Martin Morgan ♦♦ 19k
0
votes
0
answers
632
views
0
answers
1
vote
1
answer
615
views
1
answer
Plot data from VCF using Gviz?
variantannotation gviz vcf written 18 months ago by Johannes Rainer760 • updated 18 months ago by Valerie Obenchain ♦♦ 6.1k
2
votes
1
answer
257
views
1
answer
genotypeToSnpMatrix doesn't handle PL
variantannotation vcf written 19 months ago by TimothéeFlutre70 • updated 18 months ago by Stephanie M. Gogarten530
3
votes
2
answers
321
views
2
answers
2
votes
1
answer
347
views
1
answer
a filter works alone but not with other filters
variantannotation vcf filtervcf written 19 months ago by TimothéeFlutre70 • updated 19 months ago by Martin Morgan ♦♦ 19k
5
votes
1
answer
246
views
1
answer
filter "isSnp" for VCF
variantannotation vcf filtervcf written 19 months ago by TimothéeFlutre70 • updated 19 months ago by Michael Lawrence9.2k
0
votes
1
answer
388
views
1
answer
filterVcf: error with param argument
variantannotation vcf filtervcf scanvcfparam writevcf written 21 months ago by pau.puigdevall0 • updated 21 months ago by Martin Morgan ♦♦ 19k
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