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Comment: Can I run DESeq2 with SMART-Seq data
by
ATpoint
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2.4k
The choice of preprocessing is on you. There are a variety of benchmark papers and preprints you can get guidance from.
Towards prefilteri…
Comment: minfi support of illumina Infinium methylationEPIC v2.0
by
mariagallardo
•
0
setting the right array type and annotation will do the work:
rgsetext@annotation <- c(array = "IlluminaHumanMethylationEPICv2", annot…
Comment: minfi support of illumina Infinium methylationEPIC v2.0
by
mariagallardo
•
0
Thank you James for providing the annotation and manifest packages for methylationEPIC v2.0.
I have installed and loaded them, also I have…
Comment: Does it make sense to have so many statistically significant gene differentially
by
Sep
•
0
Thank you for your reply.
I did the same, and I wanted to ask if the following plot make sense or I did sth wrong?
The plot is for the gen…
Answer: How to change the dot size in plotPCA?
by
hediatnani
•
0
plotPCA(rld, intgroup = "Tissue") + geom_point(size=1)
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