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Answer: Limma - using both array and spot weights in lmFit
by
Gordon Smyth
52k
Was answered here: https://support.bioconductor.org/p/17028/
Comment: Easiest way to convert read10xMolInfo data into a dataframe in R with gene label
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daldabrown9
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For more info visit us on [R350 status check][1] [1]: https://sassagrantstatuscheck.co.za/
Answer: Margins for gene_set_enrichment_plot
by
Leonardo Collado Torres
★ 1.1k
Hi, In version 1.19.4 of `spatialLIBD` @lahuuki re-implemented the `gene_set_enrichment_plot()` function using `ComplexHeatmap::Heatmap(…
Comment: miRTarRnaseq library
by
mercedeh.movassagh
▴ 20
Maria please read the mirTarRnaSeq paper. In particular, Supplemental Table 2, clarifies all the statistical models, inputs and outputs. If…
Comment: Help using rtracklayer for gene ID extraction
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James W. MacDonald
67k
Telling me you can't do something without showing what you tried is not helpful. When posting here, try to put yourself in the shoes of peo…
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Whether to build DESeq2 model with all data and then contrast groups or subset groups first, build model and then contrast?
Answer: Feature Counts - potential bug with outfile.jcounts
Answer: Feature Counts - potential bug with outfile.jcounts
Answer: Pre-filtering TPM kallisto for ssGSEA / DESeq2
Answer: Mapping Between GenBank ID's and Uniprot
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