Bioconductor Chipseq

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1.2k

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ChIPpeakAnno ChIPSeq

updated 8 months ago by James W. MacDonald 65k • written 8 months ago by Jerina ▴ 10

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3.1k

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DiffBind chipseq

updated 9 months ago by Rory Stark ★ 5.2k • written 9 months ago by ANAMIKA • 0

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1.0k

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ChIPSeq DiffBind

updated 11 months ago by Rory Stark ★ 5.2k • written 11 months ago by lin.pei26 • 0

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1.9k

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DiffBind R chipseq

updated 5 months ago by Rory Stark ★ 5.2k • written 6.6 years ago by kyliecode • 0

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418

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chipseq DifferentialMethylation DESeq2

updated 3 months ago by Michael Love 42k • written 3 months ago by rebw25 • 0

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464

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DiffBind chipseq

updated 7 months ago by James W. MacDonald 65k • written 7 months ago by lin.pei26 • 0

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127

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chipseq

updated 26 days ago by James W. MacDonald 65k • written 26 days ago by zhulin • 0

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DiffBind macs2 chipseq

10 days ago yvonneh • 0

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184

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ChIPSeq annotation ChIPpeakAnno

3 months ago nilanjanamani88 • 0

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182

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bSubControl ChIPSeq DiffBind

3 months ago frueher • 0

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292

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ChIPpeakAnno ChIPSeq MotifDiscovery

7 months ago franciscrick41 • 0

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339

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csaw ChIPseq DiffBind

5 months ago jared.andrews07 ▴ 30

12 results • Page 1 of 1

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Answer: Gene set enrichment analysis by Guido Hooiveld ★ 3.9k

No, that is not possible. The idea of gene set enrichment analysis (GSEA) is that it checks which gene sets (pathways, GO categories) are e…

Comment: error in limma , contrast.matrix Number of rows of contrast matrix must match nu by zzrammal • 0

thank you for your response. The problem is resolved. When i did a fit for the linear model i put NULL for the design fit <- lmFit(count_…

Comment: More regions in union when increasing DBA$config$mergeOverlap by Ziliang • 0

I am so confused and frustrated learning to use this software. Isn't how you merge the peaksets one of the most important steps for the com…

Answer: SingleR Label.Ont by Denis • 0

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Comment: deseq2 results by sajadahmad41454 • 0

thank you so much and sorry for bothering you again and again, it is urgent because it is my project deadline. i have removed that sample a…

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Answer: error in limma , contrast.matrix Number of rows of contrast matrix must match nu