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Job: Summer Studentships in Data Science & Computational Biology (2019) at the University of Cambridge
R Python Computational-Biology Cancer Job
5.7 years ago Shamith.Samarajiwa ▴ 180
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Comment: Margins for gene_set_enrichment_plot by Leonardo Collado Torres ★ 1.1k
Thanks! This one might be worth remaking with `ComplexHeatmap`. Similar to https://github.com/LieberInstitute/spatialLIBD/pull/91 that was …
Comment: DESeq2 - Comparing Comparisons by James W. MacDonald 67k
Full disclosure: I don't use `DESeq2`, and find the contrasts specification confusing. Because of that, I generally recommend using `result…
Comment: DESeq2 - Comparing Comparisons by sk • 0
Hi James, Thank you for your response! Quick follow-up; if I structure my contrast as below, will it perform (A-B) - (C-D)? res_diff <…
Comment: DESeq2: Gene is DEG in one experiment but not in the other depite similar baseMe by txema.heredia • 0
You could check the reply I got to a similar issue here: https://support.bioconductor.org/p/9160134/ In short, DESeq2 uses by default `ind…
Comment: EuroBioC2024 abstract submission is open! by Jessica • 0
Mixing it up with a bunch of categories like short talks, presentation packs, posters, and contribution sessions makes sharing research and…
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Answer: Mapping Between GenBank ID's and Uniprot
Comment: What type of counts data to import for performing Isoform analysis in edgeR
A: Relations used in GO.db GOBPANCESTOR
Relations used in GO.db GOBPANCESTOR
Answer: RSubread output significantly different from bash Subread output
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