Bioconductor MultiDataSet

Showing : MultiDataSet • reset

8

votes

3

replies

2.0k

views

MultiDataSet MultiAssayExperiment

updated 7.6 years ago by Levi Waldron ★ 1.1k • written 7.6 years ago by Dario Strbenac ★ 1.6k

0

votes

1

reply

1.8k

views

summarizedexperiment rangedsummarizedexperiment multidataset

7.6 years ago s.w.vanderlaan ▴ 30

2 results • Page 1 of 1

Recent ...

Replies

Answer: Help with the code for "BiocNeighbors::generic_find_knn() function used by scran by Aaron Lun ★ 28k

It's calling C++ code, see the relevant function definitions on [GitHub](https://github.com/knncolle/BiocNeighbors/blob/master/src/generics…

Answer: DESeq2 by ATpoint ★ 4.8k

Time courses are often inevitable batches but you should have done the library prep at the same day, just extract RNA per day. If not then …

Comment: Package developing and interoperation with Bioconductor by slizchap • 0

Thank you so much for your answer. This was very useful, I will optimize my functions so they can handle SE objects.

Comment: Package developing and interoperation with Bioconductor by slizchap • 0

Thank you so much for your answer, very useful!

Comment: Error in H5Dclose(h5dataset) when trying to read in kallisto h5 files by Mike Smith ★ 6.6k

Tricky to try and debug this without some example files to work with. Can you provide the output of `traceback()` called immediately after…

Votes

Comment: ComBat with repeated measures

Awards • All