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VIPER
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630
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question on the p value for VIPER results by dorothea
RNAseq
VIPER
Doth
23 months ago
snowmattin
• 0
0
votes
0
replies
699
views
Using VIPER to compare protein activity in normal vs diseased samples
viper
2.7 years ago
tjbencomo
• 0
0
votes
2
replies
893
views
Trying to download VIPER
software error
viper
updated 4.9 years ago by
Steve Lianoglou
★ 13k • written 4.9 years ago by
rakhatib
• 0
4
votes
14
replies
3.9k
views
Data input for aracne2regulon function in viper package
viper
updated 7 months ago by
YNPAN910
• 0 • written 5.0 years ago by
maya.kappil
▴ 30
0
votes
0
replies
1.2k
views
VIPER (Protein Activity Inference) gene expression signature format
VIPER
aracne.networks
7.5 years ago
user31888
▴ 30
0
votes
1
reply
1.1k
views
Use of Viper with a regulatory network built with my dataset or another one?
viper
aracne
regulatory network
aracne.networks
7.9 years ago
ldetorrente
▴ 10
6 results • Page
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Answer: Deseq: What does "BaseMean" mean?
by
haikia120
• 0
Capture the essence of your wedding day with a [wedding photographer in Rhinebeck][1], NY, where the town's historic elegance and scenic be…
Comment: Species level information couldn't find with DADA2 bioconductor package
by
abhisek001
• 0
You will get species level information if you remove primer sequences from your reads. I did that for my data then I got species level info…
Answer: error for the geneGOEnricher function of the NoRCE package
by
James W. MacDonald
66k
This will likely require the maintainer of that package to fix. Note the error you get (or at least the English version of): ``` Error …
Answer: Understanding Contrasts and Interaction in DESeq2 for 2 genotypes, 2 treatments
by
swbarnes2
★ 1.4k
Your questions are going to be answered in a much more readable manner if you make a new column in ColData of Genotype_Treatment. Make you…
Answer: BiomaRt Possible Ensembl SSL connectivity problems detected.
by
Mike Smith
★ 6.5k
You're running a pretty old version of R and Bioconductor (it's from October 2020). Unfortunately the uswest mirror of Ensembl has been re…
Votes
A: Correct sequence of functions for edgeR, edgeR robust and edgeR QL.
A: Using spike-in RNA for normalization of Salmon counts imported using Tximport
A: Using spike-in RNA for normalization of Salmon counts imported using Tximport
Answer: Using edgeR and a spike-in to calculate absolute abundance
Answer: Using edgeR and a spike-in to calculate absolute abundance
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