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Answer: In the sesame package, what does the estimate output mean from testEnrichment()
by
James W. MacDonald
67k
It's right there in the output (`Log2(OR)`). It's doing a Fisher's exact test, which returns an odds ratio, and the output is the log odds …
Comment: WGCNA Choosing soft threshold power below R^2 0.8
by
Lluís Revilla Sancho
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730
This is not a bioconductor pacakge, but have you considered that something might be off with your data? Do you have enough samples of each …
Comment: WARNING: No Bioconductor dependencies detected.
by
katja.danielzik
•
0
Hi Laurent,
thank you for your answer! Yes, I will use the Summarized Experiment class in package.
Best,
Katja
Comment: Rsubread alignment crashes at 35%, valgrind indicates invalid writes
by
venusian.martin
•
0
EDIT:
I managed to find the documentation where `sublong` is noted :)
When I use sublong with the same inputs as in my OP, I get this err…
Comment: Rsubread alignment crashes at 35%, valgrind indicates invalid writes
by
Yang Liao
▴
440
Your command line indicates that the input files are gzipped FASTA files. Can you share with us the index and the gzipped FASTA file that c…
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