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Comment: ChAMP - obtaining beta values using EPICv2 annotation
by
Aurora
• 0
Have you solved it? I have the same problem as you
Comment: Unable to install any Bioconductor package with new R 4.4.1 - path nor writable
by
gabry.scata
▴ 10
Hi James, and thank you so much for your quick reply! That's great to know that I have installed successfully the packages i wanted. What …
Comment: pathview error "negative length vectors are not allowed
by
Evan
• 0
Same for N-glycan metabolism-- fails with `same.layer = TRUE` , smudges and comet-like shading with `same.layer = FALSE`, crowded web with …
Comment: How to conduct maSigPro analysis with only one condition?
by
James W. MacDonald
67k
Technically it's fitting an analysis of deviance (ANODEV) test, but the principle is the same - deviance, like the likelihood, measures goo…
Comment: How to conduct maSigPro analysis with only one condition?
by
James W. MacDonald
67k
Yeah, it's fine. What `maSigPro` does in this case is to reformulate the data. Your design has columns that are not useful, and `maSigPro` …
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Comment: How to conduct maSigPro analysis with only one condition?
Comment: How to conduct maSigPro analysis with only one condition?
Comment: Spectra and PSMatch- trouble in reducePSMs, joinSpectraData, or countIdentificat
Answer: How to conduct maSigPro analysis with only one condition?
Answer: How to conduct maSigPro analysis with only one condition?
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