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Comment: Error: biomaRt has encountered an unexpected server error.
by
Mike Smith
★
6.0k
Unfortunately, the BioMart LDS functionality have been flaky for a while now e.g. https://support.bioconductor.org/p/9143401/ , https:/…
Comment: Use with_go along with other filters in getBM function
by
Mike Smith
★
6.0k
Hi @rubbit0, I'm not sure I understand what you're trying to do. Do you have a long list of Ensembl Gene IDs and you're trying to select …
Comment: Adjusting for baseline when having longitudinal data, mixed model and no treat
by
Anna
▴
20
Dear Gordon, these are my metadata. As you see some subject are missing for timepoint 1
Subject Timepoint
1 ID1 Baselin…
Comment: Question on constructing design matrix and defining contrasts for analysis
by
mohammedtoufiq91
▴
10
Sure, noted.
Comment: Question on constructing design matrix and defining contrasts for analysis
by
mohammedtoufiq91
▴
10
@gordonsmyth Yes, I realized while re-running through the WGCNA workflow and forget to account for the paired experiment. For general gene …
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