Bioconductor Findoverlapsofpeaks

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chippeakanno findOverlapsOfPeaks

updated 10.0 years ago by Hari Easwaran ▴ 240 • written 10.0 years ago by da.de ▴ 30

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test fisher exact r findoverlapsofpeaks

updated 5 weeks ago by bukarimanches • 0 • written 9.3 years ago by Jurat Shahidin ▴ 80

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findOverlapsOfPeaks ChIPpeakAnno chipseq

3.4 years ago Nadav • 0

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Comment: EuroBioC2023 abstract submission is open! by arden • 0

Woohoo! Abstract submission for EuroBioC2023 is open! Time to dust off my research and get those submissions ready. Hope to see some awesom…

Comment: Gene Ontology (GO) Analysis by GA ▴ 10

Thank you!

Comment: DESEQ2 - Correctly altering log2foldchange when switching comparison direction ( by sk • 0

If I use factor to create the Condition_SCR_vs_WT coef, then the other chefs would be Condition_KD1_vs_WT and Condition_KD2_vs_WT, but I ne…

Comment: How to load scRNA-seq data from GEO by petergrahamclark • 0

the paper I'm working off suggests removing all cells where the UMI is less than 2000. I assume we don't have enough data for umi counts. c…

Comment: How to load scRNA-seq data from GEO by Gordon Smyth 52k

I suggest you use readMM() as advised by James, but then do a massive amount of cell filtering before doing any other conversions or creati…

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Comment: How to load scRNA-seq data from GEO

limma correction for tumor purity

Answer: limma correction for tumor purity

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